Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq365 154 3e-32 SEQ16359 149 1e-30 seq1673 140 7e-28 seq510 104 5e-17 seq3796 89.7 1e-12 seq993 89.7 1e-12 seq744 89.7 1e-12 seq670 86.0 1e-11 >seq365 Length=500478 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | ||| || || || || || | ||| ||| || |||||||||||||||| Sbjct 3806 ACCACCCCTCAGACGCAGCACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGA 3865 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||||||||| || || || || || ||||||||||| | || |||||| || Sbjct 3866 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGG 3925 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| || || || | ||||| ||||| | || || Sbjct 3926 AATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCACTGGGCTCCAC 3985 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| |||||||| || | ||||| || || |||||||| Sbjct 3986 CTCCAGGGTGATGGTCTTACCAGTGAGTGTCTTGACAAAGATCTGCAT 4033 Score = 149 bits (164), Expect = 1e-30 Identities = 150/195 (77%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||||||||||||||||||||||| || ||||||||||| || || || || || || || Sbjct 4129 TTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCGAA 4188 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | || |||||| ||||| || |||||||| |||||||| ||||| || | Sbjct 4189 GATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCTTTCACATT 4248 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| | || || ||||| ||||| || ||||| || | ||||| || Sbjct 4249 CTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTACCAGTGAGTGTCTTGAC 4308 Query 283088 GAATATCTGCATTTT 283102 ||| |||||||| || Sbjct 4309 GAAGATCTGCATGTT 4323 Score = 140 bits (154), Expect = 7e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | ||| || || || || || | ||| ||| || |||||||||||||||| Sbjct 8932 CCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 8991 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| ||||| || || || || || |||||||| | || || || ||| Sbjct 8992 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGATCTGGGGGA 9051 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || || ||||| |||||||| ||||| ||| | ||||| ||||| | || || Sbjct 9052 ATGCCTTCTTTGTCCTGGATCTTAGCTTTCACGTTCTCGATGGTGTCACTGGGCTCAACC 9111 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| || ||||| || | ||||| ||||| |||||||| Sbjct 9112 TCCAGGGTGATGGTTTTACCAGTGAGTGTCTTGACGAAGATCTGCAT 9158 Score = 113 bits (124), Expect = 9e-20 Identities = 125/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | ||| || || || || || | ||| ||| || |||||||||||||||| Sbjct 9160 CCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 9219 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| || || || || || || ||||||||||| | || |||||| ||| Sbjct 9220 AGGGTGCGGCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 9279 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTC 283039 || || || ||||| |||||||| || || || | ||||| ||||| Sbjct 9280 ATGCCTTCTTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTC 9326 Score = 84.2 bits (92), Expect = 5e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 282966 AAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACG 283025 |||||||| | || ||||| ||||| ||||||||||| ||||| ||||| || || Sbjct 8797 AAGATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATTTTTGCCTTGACA 8856 Query 283026 GTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTA 283085 | || || ||||| | || || || |||||||| ||||| || || | ||||| Sbjct 8857 TTCTCAATGGTGTCACTGGGCTCAACCTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTG 8916 Query 283086 ACGAATATCTGCAT 283099 ||||| |||||||| Sbjct 8917 ACGAAGATCTGCAT 8930 >SEQ16359 Length=2539 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 282881 CAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCG 282940 ||| || || ||||| || | ||| || || |||||||||||||| | || ||||| Sbjct 2535 CAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCG 2476 Query 282941 GCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTC 283000 ||||| ||||| || || || |||||||||| |||||| |||||| || || || || Sbjct 2475 ACCATCTTCTAGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTC 2416 Query 283001 CTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGT 283060 ||||| |||||||||||||| || | ||||| ||||| | || || || || || Sbjct 2415 TTTGTCCTGGATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGT 2356 Query 283061 GATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||| || ||||| |||| ||||| || || |||||||| || Sbjct 2355 GATTGTTTTACCAGTCAGGGTCTTCACAAAGATCTGCATCTT 2314 >seq1673 Length=142529 Score = 140 bits (154), Expect = 7e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || ||||| || | ||| || || |||||||||||||||| Sbjct 266 CCTCCACGGAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 207 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||||||||| || || || || || |||||||||| | || |||||| || Sbjct 206 AGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGG 147 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || || |||||||||||||||||||| || | || || ||||| | || || Sbjct 146 ATGCCTTCTTTGTCTTGGATCTTTGCTTTCACATTCTCAATGGTGTCGCTGGGCTCCACC 87 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || || | ||||| || || |||||||| Sbjct 86 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 40 >seq510 Length=807390 Score = 104 bits (114), Expect = 5e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 || || || || |||||||||| |||||| |||||| || || || || ||||| ||| Sbjct 1575 AGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGG 1634 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||||||||| || | ||||| ||||| | || || || || ||||| || ||| Sbjct 1635 ATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTA 1694 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || |||| ||||| || || |||||||| || Sbjct 1695 CCAGTCAGGGTCTTCACAAAGATCTGCATCTT 1726 Score = 104 bits (114), Expect = 5e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 || || || || |||||||||| |||||| |||||| || || || || ||||| ||| Sbjct 4235 AGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGG 4294 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||||||||| || | ||||| ||||| | || || || || ||||| || ||| Sbjct 4295 ATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTA 4354 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || |||| ||||| || || |||||||| || Sbjct 4355 CCAGTCAGGGTCTTCACAAAGATCTGCATCTT 4386 >seq3796 Length=36161 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 28184 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 28242 >seq993 Length=254094 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 147899 TTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 147957 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 158346 TTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 158404 >seq744 Length=314959 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 249884 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 249942 >seq670 Length=351828 Score = 86.0 bits (94), Expect = 1e-11 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 282988 CCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTT 283047 |||| |||| ||||| || ||||||||||| || || | ||||||||||| | | Sbjct 241934 CCGGCCTACCTTCCTTATCCTGGATCTTTGCCTTGACATTTTCGATAGTGTCGCTGGGCT 241875 Query 283048 CGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 | || || || ||||| || || |||||||| ||||| ||||| |||||||| || Sbjct 241874 CAACCTCAAGGGTGATGGTTTTCCCCGTCAACGTCTTCACGAAGATCTGCATGTT 241820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046331307322756