Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value SEQ16359 154 1e-32 seq1673 143 2e-29 seq365 138 8e-28 seq510 102 6e-17 >SEQ16359 Length=2539 Score = 154 bits (170), Expect = 1e-32 Identities = 170/224 (76%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 44115 CTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTT 44174 ||||||| | || ||||||||| || ||| |||||| ||||||||||| |||| ||| Sbjct 2539 CTCTCAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGG 2480 Query 44175 GGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACAC 44234 ||| | || || |||||||| || |||||||||| ||| ||||| || | ||| | | Sbjct 2479 TGCGACCATCTTCTAGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGC 2420 Query 44235 CTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCC 44293 |||| || ||| ||||| ||||| | ||| | ||||||||| || ||||||||| Sbjct 2419 CTTCTTTGTCCTGGATCTT-TGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCC 2361 Query 44294 ACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || || || || || ||||||||||| ||||| ||||| Sbjct 2360 AGGGTGATTGTTTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 2317 >seq1673 Length=142529 Score = 143 bits (158), Expect = 2e-29 Identities = 172/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168 |||| || | || | || ||||||||| || ||| |||||| ||||||||||| || | Sbjct 268 TTCCTCCACGGAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 209 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 || ||| | || ||||||||||| || |||||||||| | |||||| || | || Sbjct 208 ACAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCAGGAG 149 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCC 44287 | | ||||| || || ||||| ||||| | ||| | ||||||||| || ||| Sbjct 148 GGATGCCTTCTTTGTCTTGGATCTT-TGCTTTCACATTCTCAATGGTGTCGCTGGGCTCC 90 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||||| || || ||||| || |||||||||||||| ||||| |||||| Sbjct 89 ACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATG 39 >seq365 Length=500478 Score = 138 bits (152), Expect = 8e-28 Identities = 172/233 (74%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || || ||||| || ||| ||||| ||||||||||| || Sbjct 8928 CATGCCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTC 8987 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| |||| ||||||||||| || || |||||||| | ||||||||||| Sbjct 8988 AGAGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGATCTGG 9047 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | ||||| || ||| ||||| |||| | |||| | |||||||| || | Sbjct 9048 GGGAATGCCTTCTTTGTCCTGGATCTT-AGCTTTCACGTTCTCGATGGTGTCACTGGGCT 9106 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | ||||||| || || || || || ||||| ||||| |||||||| |||||| Sbjct 9107 CAACCTCCAGGGTGATGGTTTTACCAGTGAGTGTCTTGACGAAGATCTGCATG 9159 Score = 127 bits (140), Expect = 1e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | || ||| ||||| || ||| ||||| ||||||||||| || | | Sbjct 3807 CCACCCCTCAGACGCAGCACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 3866 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || ||||||||||| || ||||||||||| | |||||| || | || Sbjct 3867 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 3926 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | || ||||| ||| ||||| ||| | | | |||||||| || |||||| Sbjct 3927 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACC 3986 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||| || || ||||| || ||||| ||||| || ||||| |||||| Sbjct 3987 TCCAGGGTGATGGTCTTACCAGTGAGTGTCTTGACAAAGATCTGCATG 4034 Score = 111 bits (122), Expect = 1e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 || |||||||||||||| || | ||| ||| | || ||||||||||| || || ||| Sbjct 4130 TCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCGAAG 4189 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 ||||| | |||||| || | ||| | |||||||| ||| ||||| |||| | || Sbjct 4190 ATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTT-GGCTTTCACATT 4248 Query 44267 C-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | |||||||| || || ||||| | || || || || || ||||| ||||| || Sbjct 4249 CTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTACCAGTGAGTGTCTTGAC 4308 Query 44326 GAAGATTTGCATG 44338 |||||| |||||| Sbjct 4309 GAAGATCTGCATG 4321 Score = 96.9 bits (106), Expect = 2e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || || ||||| || ||| ||||| ||||||||||| || Sbjct 9156 CATGCCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTC 9215 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| |||| ||||||||||| || ||||||||||| | |||||| || | Sbjct 9216 AGAGAGGGTGCGGCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCAGG 9275 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||||| || ||| ||||| ||| | | | ||||||||| || || Sbjct 9276 GGGAATGCCTTCTTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCGCTGGGCTC 9335 Query 44287 CACCTCCA 44294 ||||||| Sbjct 9336 AACCTCCA 9343 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242 || ||||||||||| || || |||||||| | |||||| |||| || | ||||| || Sbjct 9658 TCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCTTTG 9717 Query 44243 TCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302 ||| || || ||| | | | |||||||| || |||||||| | || || Sbjct 9718 TCCTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCTAGGGTGATG 9777 Query 44303 GTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| || || ||||| ||||| ||||| |||||| Sbjct 9778 GTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCATG 9813 >seq510 Length=807390 Score = 102 bits (112), Expect = 6e-17 Identities = 114/150 (76%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||||| ||| ||||| || | ||| | ||||| || ||| Sbjct 1575 AGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGG 1634 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| | ||| | ||||||||| || |||||||||| || || || || Sbjct 1635 ATCTT-TGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTT 1693 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||||||||| ||||| ||||| Sbjct 1694 ACCAGTCAGGGTCTTCACAAAGATCTGCAT 1723 Score = 102 bits (112), Expect = 6e-17 Identities = 114/150 (76%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||||| ||| ||||| || | ||| | ||||| || ||| Sbjct 4235 AGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGG 4294 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| | ||| | ||||||||| || |||||||||| || || || || Sbjct 4295 ATCTT-TGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTT 4353 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||||||||| ||||| ||||| Sbjct 4354 ACCAGTCAGGGTCTTCACAAAGATCTGCAT 4383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359856962133438