Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq797 163 4e-35 seq1029 147 3e-30 seq335 91.5 2e-13 >seq797 Length=296498 Score = 163 bits (180), Expect = 4e-35 Identities = 185/248 (75%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 8303 GGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCG 8362 |||||| |||| |||| ||| || || || | ||| | | | |||||||| Sbjct 254761 GGACACGACTTGGTGTTGAGACACACCAGCTTCTTCAAAGTGGAGGTTTTGACGATGTTA 254820 Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422 || ||| ||||| |||||||||||||||||||||||| | |||||||||||| ||| Sbjct 254821 AAGCCCGTCTCTCCTCCGAAGGTGCTGGGCTTCCAGTACTCAGGGGAGCAGATGGGGTTT 254880 Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482 ||| |||||||| |||||||| ||||| |||| ||| | ||||||||||| || ||| Sbjct 254881 CCCAGAAGGCCTTTCAGGGAGAAGGGAGCACCCATCTCCACCATGCTCTCACCAAATATG 254940 Query 8483 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCT 8542 ||| ||||| | || |||| || || |||| ||| | ||||| ||| || | |||| Sbjct 254941 CTGTTAGGACGAGCTTTCTCCAGCAGGACGCCGGGGTAAAACTCCAGAGCATCTATGTCT 255000 Query 8543 CCGTAAAG 8550 ||||| || Sbjct 255001 CCGTAGAG 255008 Score = 123 bits (136), Expect = 4e-23 Identities = 183/258 (71%), Gaps = 6/258 (2%) Strand=Plus/Plus Query 9231 TTCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATG 9290 ||| || || || ||||||| ||||||||||| || ||||| ||| ||| ||||| Sbjct 259232 TTCACCAATGATAATGAGTCTGGTGGTCTGGAAAAGCTGCTCATCATCCCAGCTGGGATG 259291 Query 9291 TTCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACAT 9350 ||| ||||| | || || || |||||||| ||||| ||||| || ||||||||||| Sbjct 259292 TTCGACCTTCAGGATGTCACAGACTCTGTTGTGCTCCCTCAGCCATATGGTGGCGTACAT 259351 Query 9351 CATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGG 9410 |||| || || | |||||||| |||| ||||||| ||||| ||| | | || Sbjct 259352 GGTGAGGCCCGGCAGGAGGCCAAACACCTCCTGACCGATGGCCAGGCGCTGCTCAGCTGG 259411 Query 9411 CA---CTTCGGGAGGATAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACAT 9467 | |||| ||| || | ||||||||| |||| || |||| || || ||||| Sbjct 259412 GAAGCCTTC---AGGGTAAACCATGTGCACAGGGACCTCAGATACCGTAGGTGGGTACAT 259468 Query 9468 TTCACCGTCAATCATCTG 9485 ||||| | | |||||| Sbjct 259469 CTCACCATTTACCATCTG 259486 >seq1029 Length=384109 Score = 147 bits (162), Expect = 3e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 8345 GCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCC 8404 ||| | |||| ||| ||| |||||| || |||||||||||||| ||||||||| | Sbjct 197591 GCGGTGTTGATGATGTTGAAGCCCACGGTGCCTCCGAAGGTGCTGGGTTTCCAGTACTCT 197650 Query 8405 GGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGA 8464 || ||||||||| |||| |||| | ||| ||||| ||||| || ||||||| ||| | Sbjct 197651 GGAGAGCAGATGGCGTTTCCCATTAAGCCCTTGAGAGAGAAAGGGGCCCCCATCTCCACC 197710 Query 8465 ATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGC 8524 || |||| || ||||||||||||| | ||| || ||||||| || || | ||| ||| Sbjct 197711 ATTGTCTCTCCAAAGATGGCGTTGGCCCTGGGTTTCTCCACCAGCAAGCCCGGGTAGAGC 197770 Query 8525 TCCACAGCCTCGACGTCTCCGTAAAG 8550 |||| || |||| || ||||| || Sbjct 197771 TCCATGGCGTCGATGTGGCCGTACAG 197796 Score = 127 bits (140), Expect = 3e-24 Identities = 123/158 (78%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 9235 CCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCT 9294 || || | |||||||| ||||||||||| || ||||| ||| || || || | Sbjct 199296 CCAATCAGGATGAGTCTTGTGGTCTGGAAGAGCCTTTCGTCGTCCCAGTCGGGGTGAACC 199355 Query 9295 TGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATG 9354 | ||||| || || ||||||| ||||||||| | ||||||||| |||||||||||||| Sbjct 199356 TCCTTCAGCACGTCACACACCCGGTTGTGTTCGCGGAGCCAGATGGTGGCGTACATCATC 199415 Query 9355 AGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGC 9392 || ||||| |||||||| || ||||| || |||||||| Sbjct 199416 AGACCAGGAACCAGGCCGAATGCCTCGTGGCCGACAGC 199453 >seq335 Length=518472 Score = 91.5 bits (100), Expect = 2e-13 Identities = 176/258 (68%), Gaps = 4/258 (2%) Strand=Plus/Minus Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291 || ||||| |||||||| || ||||| ||||| || ||||||||| ||| ||||| Sbjct 115895 TCACCGATGATGATGAGCCGTGTGGTTTGGAAAAGCTGCTCGTCATCCCAGGTGGGATGC 115836 Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351 ||| ||||| | || || || | |||||| ||||| ||||| | ||||||||||| Sbjct 115835 TCTGCCTTCAGGATGTCACAGACTCGGTTGTGCTCCCTCAGCCACAGGGTGGCGTACATT 115776 Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGC 9411 | ||||| | || ||||| | || || || | |||| || || | || Sbjct 115775 CCTAAACCAGGAAGAAGTCCAAACACTTCCTGCCCAATGGCCATCTGCTGGTGCACAGGG 115716 Query 9412 ACTTCGGGAGGATAGATCATGTGCACCTGGA--CGTCTTTGACCGAGGGGGGATACATTT 9469 ||| | ||||| ||| |||| || ||| | || || ||||| || ||||| | Sbjct 115715 ACTCCAGGAGGGTAGCTCATCCTAAC--GGATGCTTCAGCTACAGAGGGAGGGTACATCT 115658 Query 9470 CACCGTCAATCATCTGAT 9487 | || ||||| | ||||| Sbjct 115657 CTCCATCAATTAACTGAT 115640 Score = 87.8 bits (96), Expect = 3e-12 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 8375 CCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCT 8434 || || |||||||||||||||||||| | || || || || ||| ||| ||||||| Sbjct 120164 CCTCCAAAGGTGCTGGGCTTCCAGTAATCTGGAGAACATATAGGGTTTCCCAGGAGGCCT 120105 Query 8435 TTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGG 8494 ||||||||||| || || |||| ||| | ||||| || || || ||||| || || Sbjct 120104 TTGAGGGAGAAGGGGGCGCCCATCTCCACCATGCTTTCTCCAAATATGGCCCCCGGTCGT 120045 Query 8495 GGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGA 8537 | || |||| || || || | || | || ||||| |||| Sbjct 120044 GTTTTCTCCAACATCAAGCCAGGATAAAATTCAACAGCGTCGA 120002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716604261362560