Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphilophus_20citrinellus_20[genbank_20GCA_5F000751415.1_202014-09- 07] 6,637 sequences; 844,902,565 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq913 95.1 1e-14 >seq913 Length=88738 Score = 95.1 bits (104), Expect = 1e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 17226 GGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGG 17285 |||| | || ||||| ||||| || ||||||||||| || ||||| ||||||||||||| Sbjct 60574 GGTCCTTGATGTACGTGTCGATCAGCAGGCTGTACATCTCCGAGTGGATGTTCTCCATGG 60515 Query 17286 CTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC 17332 | ||||| || ||||| || || ||||| |||| | || |||||| Sbjct 60514 CGATCTGGAAACCGTAGAAACACCGGGCCTCCGTCACCTGCACTTCC 60468 Score = 95.1 bits (104), Expect = 1e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 17226 GGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGG 17285 |||| | || ||||| ||||| || ||||||||||| || ||||| ||||||||||||| Sbjct 73865 GGTCCTTGATGTACGTGTCGATCAGCAGGCTGTACATCTCCGAGTGGATGTTCTCCATGG 73924 Query 17286 CTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC 17332 | ||||| || ||||| || || ||||| |||| | || |||||| Sbjct 73925 CGATCTGGAAACCGTAGAAACACCGGGCCTCCGTCACCTGCACTTCC 73971 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 |||||||||||||||| || ||||| || || |||| || |||||| || | |||| Sbjct 60974 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCCGGCATCAGGCCCCTCTTCT 60915 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGG 17096 | | ||| || || ||||| || || ||||| ||||| || ||||| |||| Sbjct 60914 TCAGCCAGAAGATGGCGGCAAAGGAGCCAGAGAAGAAGATCCCCTCCACGG 60864 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 |||||||||||||||| || ||||| || || |||| || |||||| || | |||| Sbjct 73465 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCCGGCATCAGGCCCCTCTTCT 73524 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGG 17096 | | ||| || || ||||| || || ||||| ||||| || ||||| |||| Sbjct 73525 TCAGCCAGAAGATGGCGGCAAAGGAGCCAGAGAAGAAGATCCCCTCCACGG 73575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517502663123160