Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphilophus_20citrinellus_20[genbank_20GCA_5F000751415.1_202014-09- 07] 6,637 sequences; 844,902,565 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq905 109 4e-19 >seq905 Length=872545 Score = 109 bits (120), Expect = 4e-19 Identities = 118/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 97123 TGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCC 97182 || |||||||| | || | || |||||||| || || || ||||||||||| || ||| Sbjct 152695 TGTGCGATCATGTAGGTAAGAAGTGAATAGCTGGCGATATTGAAAGGCACCCCCAGGCCC 152754 Query 97183 ATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTGA 97242 |||||| |||| | || || | |||||| || |||| |||||||| ||||| ||||| Sbjct 152755 ATATCACCTGAGCGCTGGTACAGCTGACACGACAGCTCACCATCACAYACATAGAACTGG 152814 Query 97243 CTCAATACATGACAGGGGGGCAACGCCATTTTTGGAA 97279 | | | | || ||||| |||| |||||| | |||| Sbjct 152815 CAGAGTGCGTGGCAGGGTGGCAGCGCCATCCTAGGAA 152851 Score = 102 bits (112), Expect = 6e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 || ||||| ||||| |||||||| ||||| ||||| | |||||| || || || || ||| Sbjct 153195 TACTCTGCACCAAAGTGCCTCCACTGGAAACCATATATAGGTCCTAGATCACCCTCCTCT 153254 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGC 97521 |||||| ||| ||||| || || || || | ||| ||||| ||||||||||| | | Sbjct 153255 CTATCAGTGAACCCAAGATTGTCCAAGAAGTCTCGAGAACCATTGGCATCCCAAATCTTC 153314 Query 97522 ACACCAGATGCTGCAAGCTCTTTG 97545 || || |||| |||||| ||| Sbjct 153315 ACGCCTTTCGCTGAAAGCTCCTTG 153338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346755949184090