Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphilophus_20citrinellus_20[genbank_20GCA_5F000751415.1_202014-09- 07] 6,637 sequences; 844,902,565 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq1529 104 4e-17 >seq1529 Length=688786 Score = 104 bits (114), Expect = 4e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 51885 GATAGCCAGAGCATTATGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGT 51944 ||||||| ||| | |||| |||||| | |||||||| | || | ||||||||| || Sbjct 587367 GATAGCCTCAGCTCTTTGGTGGTACTACGTCTCCAAAGGAGTGGAGTTCTTGGATACAGT 587308 Query 51945 ATTTTTCATACTTAGGAAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTT 52004 ||||||||||| ||||| || || ||||| || || || || ||||| || ||||| | Sbjct 587307 CTTTTTCATACTGAGGAAGAAGTTCAATCAAGTCAGCTTCCTCCACGTCTACCATCACTG 587248 Query 52005 TACTATGTTTACTCTAGGATGGATAGGTATTAAATGG 52041 || ||||| | || | ||||| || || |||||| Sbjct 587247 CACCATGTTCATCCTCTGGTGGATTGGAATCAAATGG 587211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923120209285480