Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphilophus_20citrinellus_20[genbank_20GCA_5F000751415.1_202014-09- 07] 6,637 sequences; 844,902,565 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq33 84.2 2e-11 >seq33 Length=2144867 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || || || || || ||||||||||| | || || | |||| Sbjct 1190495 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 1190436 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| ||| |||| || || || || || ||| | ||| ||||| || Sbjct 1190435 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTGTCC 1190376 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 |||| ||| || | | ||| ||||| | |||||| || | ||||||| | Sbjct 1190375 TGGATTTTGGCCTTTACATTTTCAATTGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTC 1190316 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTT 18329 ||||| || | || || ||||| || ||||| ||| Sbjct 1190315 TTGCCAGTGAGGGTCTTGACAAAGATCTGCATCTTT 1190280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379313315456565