Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphilophus_20citrinellus_20[genbank_20GCA_5F000751415.1_202014-09- 07] 6,637 sequences; 844,902,565 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1156 141 7e-29 >seq1156 Length=1216136 Score = 141 bits (156), Expect = 7e-29 Identities = 168/224 (75%), Gaps = 3/224 (1%) Strand=Plus/Plus Query 91815 CCTGCAAAGAGGACTACAACATCATCATGGACACTGTCAGACAA-CTGGAACAAAGTGGC 91873 ||| ||| ||||||| || ||||||| ||||| | || ||| || || | ||||| Sbjct 1110753 CCTCCAAGGAGGACTGCAGAATCATCACAGACACAG-CATCCAAGCTCGAGCGCTGTGGC 1110811 Query 91874 TTCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCTGCGCAACTCGGCACTG 91933 ||||||||||||||| |||| || ||||| || || || ||||| || || | | || Sbjct 1110812 TTCTACTGGGGTCCTCTGGGAGTGGAGGACGCTCACCGCATGCTTCGGGACGCCCCGCTA 1110871 Query 91934 GGCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTGTTCACGCTGTCGTATCAC 91993 |||||||| ||||| || || ||| | || || ||||| || ||||| ||||| || ||| Sbjct 1110872 GGCAGCTTCCTCATCCGTGACAGCCGTCAGAAAGACGTTTTCTTCACACTGTCCTACCAC 1110931 Query 91994 TCTGTGACCGGACCCGTCAGTGTGAGGATTGAATACAAG-GACA 92036 | || ||| || ||||||||| | ||||| |||||| |||| Sbjct 1110932 GCCAAGAACGGGCCGGTCAGTGTGCGCATTGACTACAAGAGACA 1110975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356204784820711