Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphilophus_20citrinellus_20[genbank_20GCA_5F000751415.1_202014-09- 07] 6,637 sequences; 844,902,565 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq33 98.7 7e-16 >seq33 Length=2144867 Score = 98.7 bits (108), Expect = 7e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 ||||||| |||| | | ||| | || |||||||| || || || |||||||| || Sbjct 1213481 TGCCACCCCTCAGACGGAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 1213422 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 ||| | | | ||||| | || ||||||||| | |||| | || ||||| | Sbjct 1213421 ACAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGGG 1213362 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 |||| ||||||||||| |||||| ||| ||| | || ||||| ||||| || | Sbjct 1213361 GAATCCCTTCTTTGTCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCAA 1213302 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTG 15368 | || | ||| ||||| || || || || || || || || || ||||| |||| Sbjct 1213301 CCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATCTTTG 1213248 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 || |||||||| || || || |||||||| || || | | | ||||| | || Sbjct 1190714 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGC 1190655 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 ||||| || | |||| | || |||||| ||||| ||||||||||| |||||| Sbjct 1190654 TTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCTTTGTCCTGGATTTTG 1190595 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||||||| |||| || || ||||| || || || | ||| ||||| || || || Sbjct 1190594 GCCTTTACATTTTCAATTGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTG 1190535 Query 15341 AGAGTTTTTACAAAAATTTGCATA 15364 || ||||| ||||| || |||||| Sbjct 1190534 AGGGTTTTCACAAAGATCTGCATA 1190511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362149903890417