Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphilophus_20citrinellus_20[genbank_20GCA_5F000751415.1_202014-09- 07] 6,637 sequences; 844,902,565 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq905 116 3e-21 >seq905 Length=872545 Score = 116 bits (128), Expect = 3e-21 Identities = 131/174 (75%), Gaps = 1/174 (1%) Strand=Plus/Plus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 |||||| ||||||||||| || || | |||||||||||| || || | |||||||| || Sbjct 153185 CATGTCTGTGTACTCTGCACCAAAGTGCCTCCACTGGAAACCATATATAGGTCCTAGATC 153244 Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892 || || || || | || || || ||||| ||||||| ||||||||||| || Sbjct 153245 ACCCTCCTCTCTATCAGTGAACCCAAGATTGTCCAAGAAGTCTCGAGAACCATTGGCATC 153304 Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGAC 25946 ||| ||||| || || ||| | || ||||| ||||| ||||| || || ||||| Sbjct 153305 CCAAATCTTCACGCCTTTCGCTGAAAGCTCCTTGGAATTTGTTGATCC-CTGAC 153357 Score = 84.2 bits (92), Expect = 1e-11 Identities = 116/162 (72%), Gaps = 1/162 (1%) Strand=Plus/Plus Query 25491 AGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGT 25550 || || |||| || || |||||||| || || || | ||||||||||| || || || Sbjct 152683 AGTCCTGTAATGTGTGCGATCATGTAGGTAAGAAGTGAATAGCTGGCGATATTGAAAGGC 152742 Query 25551 ACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCT 25610 ||||| | ||||| | | || || | |||||| ||||||||||| ||||| | || | Sbjct 152743 ACCCCCAGGCCCATAT-CACCTGAGCGCTGGTACAGCTGACACGACAGCTCACCATCACA 152801 Query 25611 CACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTAT 25652 || || ||||| || | | || ||| || || || || || Sbjct 152802 YACATAGAACTGGCAGAGTGCGTGGCAGGGTGGCAGCGCCAT 152843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340110086801001