Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphilophus_20citrinellus_20[genbank_20GCA_5F000751415.1_202014-09- 07] 6,637 sequences; 844,902,565 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq33 84.2 2e-11 >seq33 Length=2144867 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || ||||| ||||| | || ||||| ||||| ||| |||| || |||||| Sbjct 1190512 ATGCAGATCTTTGTGAAAACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCCAGC 1190571 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | ||||| ||||| |||||||||||| |||| ||| || Sbjct 1190572 GACACAATTGAAAATGTAAAGGCCAAAATCCAGGACAAAGAAGGCATTCCTCCCGACCAG 1190631 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || ||||| || | ||| ||||| || |||||||| || || | || || || Sbjct 1190632 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 1190691 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415 || || || || || || || || | || ||||||| | ||||||| Sbjct 1190692 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTCAGGGGTGGCA 1190740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423005780955400