Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphilophus_20citrinellus_20[genbank_20GCA_5F000751415.1_202014-09- 07] 6,637 sequences; 844,902,565 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1027 152 2e-31 seq90 84.2 9e-11 >seq1027 Length=1617720 Score = 152 bits (168), Expect = 2e-31 Identities = 427/649 (66%), Gaps = 13/649 (2%) Strand=Plus/Minus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 ||||| |||||||| || ||||||| ||||||||| || |||| ||| |||| || ||| Sbjct 1391434 ATTGGCATTGATCTGGGCACCACCTATTCATGTGTTGGGGTTTTCCAGCATGGCAAAGTA 1391375 Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGT----TTTAC 451032 || || || || || || || || | || ||||| || | || || ||||| Sbjct 1391374 GAGATCATTGCCAACGATCAGGGCAATAGGACCACTCC--CA--GCTACGTGGCCTTTAC 1391319 Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAATGCCAAAA 451091 || ||||||| || | || | ||||| || | | | | | | | || |||| | Sbjct 1391318 TGACACAGAAAGGCTCATTGGAGATGCTGCCAAGAACCAAGTTGCAATGAACC-CCAACA 1391260 Query 451092 ACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAA 451151 ||||| | | |||||| ||||| | ||||| | | || | |||| | ||| || Sbjct 1391259 ACACAATCTTTGATGCCAAACGGCTGATTGGAAGAAAGTTTAATGACCCAATTGTCCAGT 1391200 Query 451152 AAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAG 451211 || | ||| ||| ||| | || | | | | || ||||||||| | | || | Sbjct 1391199 CTGACATGAAACTCTGGCCTTTCAAGGTGATCAGTGATAATGGAAAGCCCAAAGTCCAGG 1391140 Query 451212 TAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTA 451271 | | || ||||| || || || | || |||||| |||||||| || ||||| || Sbjct 1391139 TGGAGTACAAAGGGGAGACCAAGGCGTTCTATCCTGAGGAAATTTCTTCCATGGTCCTGG 1391080 Query 451272 CTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTA 451331 ||||||||| || | ||| || ||| | || || | ||||||| || | Sbjct 1391079 TTAAAATGAAGGAGATAGCTGAGGCCTATCTGGGACAGAGGGTGTCAAATGCAGTCATCA 1391020 Query 451332 CTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTG 451391 | || || || ||||||||||| |||| | ||||| || || ||||| || || Sbjct 1391019 CAGTGCCAGCKTATTTCAATGACTCACAGAGACAAGCCACCAAGGATGCTGGGGTGATCT 1390960 Query 451392 CTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGAC 451451 |||| |||||||||| | || || ||||| || |||||||| || | || || || | Sbjct 1390959 CTGGACTAAATGTTCTGAGGATCATCAATGAGCCCACAGCAGCAGCCATTGCCTACGGCC 1390900 Query 451452 TAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAA 451511 | ||| || | ||| || |||| ||||| | | |||||| |||||||||| | Sbjct 1390899 T-GGATAA--AGGTAAAAGAGGAGAACGCAATATACTGATCTTTGATCTTGGTGGAGGCA 1390843 Query 451512 CTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAA 451560 | ||| || | | | ||||| ||||| | ||||| ||||| Sbjct 1390842 CCTTTGACGTGTCAATCTTGACCATTGAGGATGGCATCTTTGAGGTAAA 1390794 >seq90 Length=2335785 Score = 84.2 bits (92), Expect = 9e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| || | ||||| || || || ||||||||||| || || ||||| ||||| |||| Sbjct 1494033 ATGCTGTGGTCACTGTCCCTGCCTACTTCAATGATGCCCAGCGCCAAGCCACTAAGGATG 1494092 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACC 451425 | || ||||||||| | |||||| | ||||| || |||||||| Sbjct 1494093 CTGGTACCATTGCTGGTCTGAATGTTATGCGAATCATCAATGAACC 1494138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975550391698796