Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphilophus_20citrinellus_20[genbank_20GCA_5F000751415.1_202014-09- 07] 6,637 sequences; 844,902,565 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1696 210 3e-49 >seq1696 Length=952724 Score = 210 bits (232), Expect = 3e-49 Identities = 949/1480 (64%), Gaps = 34/1480 (2%) Strand=Plus/Plus Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678 ||||| ||||| | || || | || ||||| ||| ||||| || | | | |||| Sbjct 104493 ACATGCTCATGAGAGTGGCCGTGGGAATCCACGGGACGGATATCGACGCAGCCATCGAGA 104552 Query 111679 CATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCT 111737 | ||| || | |||| | || ||||| |||||| | |||||||||||||| ||| Sbjct 104553 CCTACAACCTGCTGTCGGAGAAGTG-GTTCACCCACGCCTCTCCAACCCTCTTCAATGCT 104611 Query 111738 GGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATC 111797 || || || || || |||| || || ||||| |||||| ||||| || ||| Sbjct 104612 GGAACCAACAGGCCACAGCTGTCTAGCTGCTTCCTGCTTGCAATGAAGGACGACAGCATC 104671 Query 111798 AATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATC 111857 | ||||| |||| ||| || | |||| |||| ||||| || | ||| || || ||| Sbjct 104672 GAGGGCATCTACGACACACTGAAGCAATGCGCCCTCATCTCCAAATCGGCCGGCGGAATC 104731 Query 111858 GGGATGCA-CATCCATGATG--TCAGAGCCAACAAGTCTC-GTATTAGAGGTACAAATGG 111913 || | | | || | || ||||| ||||| | | || || || || || Sbjct 104732 GG--YGTAGCGGTCA-GCTGCATCAGA-TCAACAGGGAGCTACATCGCTGGCACCAACGG 104787 Query 111914 TCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAA 111973 || |||| | | || ||||| | || | ||| ||| || || || || | Sbjct 104788 CTGCTCCAATGGGCTCGTCCCCATGCTGAGGGTCTACAACAACACTGCACGTTACGTCGA 104847 Query 111974 CCAAGCTGGGCGTCGCAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGG 112029 || || |||| | ||| ||| | |||| | || || ||||| ||||| | Sbjct 104848 CC-AGGGGGGCAACAAAAGACCCGGAGCCTTCGCCATGTACCTGGAGCCCTGGCATTTTG 104906 Query 112030 ATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCG 112089 || | | || ||||| ||| || ||| || | || ||| ||| | | Sbjct 104907 ATGTGTTTGACTTCCTGGAGCTGAAGAAGAACACGGGAAAGGAAGAGCAGCGAGCGAGGG 104966 Query 112090 ATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCA 112149 | || |||| ||| || ||||| || || |||||||||||||| || ||| | | || Sbjct 104967 ACCTTTTCTACGCCCTGTGGATCCCTGACCTCTTCATGAAGAGGGTGGAGAATAATGAAG 105026 Query 112150 ATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA-TGCCGTGGGTGAGGAG 112208 | ||||| || | ||||| | | | ||||| || ||| ||| | ||| |||||| Sbjct 105027 ACTGGTCCCTGATGTGTCCGGCCGACTGCCCCGGGCTGGACGAGTGCTG-GGGGGAGGAG 105085 Query 112209 TTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCG-ACGGTGCCAGC 112267 ||||| | |||||||| | |||||| | || | ||| | ||| |||| || Sbjct 105086 TTTGAGGAGCTCTACACCAGATACGAGAAGGAGGGGAGGGTCA-AGCGTGTGGTGAAGGC 105144 Query 112268 TGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCT 112327 | | ||||| | || || | |||| || || || ||||| || || || ||||| Sbjct 105145 TCAGCAGCTGTGGTACGCCATCATTGAGTCACAGACAGAAACTGGGACGCCGTACATGCT 105204 Query 112328 TTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTC 112387 |||||||| ||||| ||| ||||| || || ||||| |||| |||||| | Sbjct 105205 GTACAAAGAYGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGGGGACCATCAAGTGCAG 105264 Query 112388 CAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCT 112447 ||||||||| ||||||||| | |||| || ||| || ||| |||||| || || || Sbjct 105265 CAACCTCTGCACAGAAATCGTCGAATACACCAGCAAGGACGAGGTGGCTGTCTGCAATCT 105324 Query 112448 CGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAA 112507 || || ||||||||| || ||| || || ||| ||| | ||| | | |||| Sbjct 105325 GGCCTCCATCGCTCTCAACATGTACGTCACACCTGAG---CGGACTTATGACTTTAAAAA 105381 Query 112508 ACTCCACGAAGTTACGAA---AACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAA 112564 ||| || || || || |||| | |||| |||||| |||| || | ||| Sbjct 105382 ACTGGCATCTGTGACCAAAGTAATTGTC---AGAAACTTAAACAAGATTATCGACATAAA 105438 Query 112565 TTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGG 112624 | ||||| || || || | ||||||||| | ||| | ||||| || | || Sbjct 105439 CTACTACCCAGTGGAAGAGGCCAAGAGGTCTAATATGCGCCACAGGCCAATAGGAATTGG 105498 Query 112625 TGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGC 112684 |||||||| | || || | || || || || | ||||||| | || || Sbjct 105499 AGTCCAAGGATTGGCTGACGCCTTTATCCTGATGCGTTATCCATTTGAAAGCCCTGAGGC 105558 Query 112685 GAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTC 112744 || |||| | || |||||||| || || |||| ||||| |||||||||| Sbjct 105559 TCAGCTGCTCAACATCCAAATCTTTGAGACCATTTACTACGCTGCTCTGGAGGCGAGTTG 105618 Query 112745 GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA-CAAG 112803 ||||| || | | | || || || || || | || ||||| || | ||| ||| Sbjct 105619 TGAGTTAGCCGCCGAACACGGCCCCTACGAGACGTACGAAGGTTCCCCGG--TCAGTAAG 105676 Query 112804 GGGTGCTT-CAATTTGATATGTGGGAAGGTGAGACCAA-GCTTCACTACGACTGGGACGC 112861 || ||| || | || |||| ||||| || |||| | | | |||||| | || Sbjct 105677 GGCATCTTCCAGTACGACATGT-GGAAGAAGACGCCAACGGACCTGTGGGACTGGAAGGC 105735 Query 112862 TCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCC 112921 || ||||| || | | || | | ||||| || || |||| |||||||| Sbjct 105736 GCTGAAGGAGAAGGTCGCCAAACACGGCGTGAGGAACAGCCTGCTGCTGGCTCCAATGCC 105795 Query 112922 AACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAA 112981 ||| ||||||||||| || ||| |||| || || || | | | || ||||||| | || Sbjct 105796 AACGGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATCGAGGCCTACACCAGCAA 105855 Query 112982 CATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGA 113041 |||||| | || || | ||||||||| ||| |||||| || || | | Sbjct 105856 CATCTACACCCGCAGGGTGCTGTCAGGAGAGTTTCAGATCGTCAACCCTCACCTGCTCAA 105915 Query 113042 TGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG 113081 ||||| | |||| || || ||| | |||| |||||| Sbjct 105916 AGACCTGACGGAGAGGGGACTGTGGAGCGAGGACATGAAG 105955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620690901658640