Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphilophus_20citrinellus_20[genbank_20GCA_5F000751415.1_202014-09- 07] 6,637 sequences; 844,902,565 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1696 459 5e-124 seq1028 190 4e-43 seq97 183 6e-41 seq465 152 1e-31 seq173 114 2e-20 seq913 111 3e-19 seq455 111 3e-19 seq84 107 4e-18 seq34 96.9 6e-15 seq292 95.1 2e-14 seq1698 93.3 8e-14 >seq1696 Length=952724 Score = 459 bits (508), Expect = 5e-124 Identities = 1052/1565 (67%), Gaps = 36/1565 (2%) Strand=Plus/Minus Query 212858 CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTAT 212917 |||||||||| |||| || ||||| | |||| |||| ||||||||||||||| || Sbjct 105952 CATGTCCTCGCTCCACAGTCCCCTCTCCGTCAGGTCTTTGAGCAGGTGAGGGTTGACGAT 105893 Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977 ||| || || ||||| |||||||| | ||| | ||| ||||||| ||||||| Sbjct 105892 CTGAAACTCTCCTGACAGCACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCCTCGATGGA 105833 Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACT 213037 ||||||||| ||||| ||||| || ||| ||| || ||||| ||||||| ||| || || Sbjct 105832 CTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTTGGCATTGGAGCCAGCAGCAGGCT 105773 Query 213038 GTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGA 213097 ||||||||| ||||| | | ||| | ||| | ||||||||| Sbjct 105772 GTTCCTCACGCCGTGTTTGGCGACCTTCTCCTTCAGCGCCTTCCAGTCCCA--------- 105722 Query 213098 CAGGTCC-TCGTC--CTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGG 213154 ||||||| | | | |||| ||||||||||| |||| |||||||| || || || || Sbjct 105721 CAGGTCCGTTGGCGTCTTC---TTCCACATGTCGTACTGGAAGATGCCCTTACTGACCGG 105665 Query 213155 GCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAG 213214 | || | ||| | ||||||||| || || ||| | ||| || ||||| ||| Sbjct 105664 GGAACCTTCGTACGTCTCGTAGGGGCCGTGTTCGGCGGCTAACTCACAACTCGCCTCCAG 105605 Query 213215 GGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGT 213274 ||||||||||| ||||| ||||| || | |||||||| || ||||| ||| Sbjct 105604 AGCAGCGTAGTAAATGGTCTCAAAGATTTGGATGTTGAGCAGCTGAGCCTCAGGGCTTTC 105545 Query 213275 GAAGGGCATCAT-CATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGG 213333 || || || | ||| | || | ||||||| || ||||| || || || || | Sbjct 105544 AAATGG-ATAACGCATCAGGATAAAGGCGTCAGCCAATCCTTGGACTCCAATTCCTATTG 105486 Query 213334 GTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGA 213393 | ||||| | || |||||| | | ||| |||| ||||| |||| |||||| | Sbjct 105485 GCCTGTGGCGCATATTAGACCTCTTGGCCTCTTCCACTGGGTAGTAGTTTATGTCGATAA 105426 Query 213394 TCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACA 213453 ||||||| | ||| | | |||||||| ||| ||||| | | | | | | Sbjct 105425 TCTTGTTTAAGTTTCTGACAATTACTTTGGTCACAGATGCCAGTTTTT--TAAAGTCATA 105368 Query 213454 CGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCA 213513 || | | | || || || || |||||| |||||| ||||| || |||| Sbjct 105367 AGTCCGCTCAGGTGTG-ACGTACATGTTGAGAGCGATGGAGGCCAGATTGCAGACAGCCA 105309 Query 213514 CCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGC 213573 |||| | | ||||| || | ||| || ||||| ||||||||||| |||||| | Sbjct 105308 CCTCGTCCTTGCTGGTGTATTCGACGATTTCTGTGCAGAGGTTGCTGCACTTGATGGTCC 105249 Query 213574 CCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACC 213633 |||| ||||| ||||| ||| |||| | || ||||| |||||||| || | || Sbjct 105248 CCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCRTCTTTGTACAGCATGTACGGCGTCC 105189 Query 213634 CGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCC 213693 | || ||| ||| ||| | | || | ||| || | | ||||| ||||| ||| Sbjct 105188 CAGTTTCTGTCTGTGACTCAATGATGGCGTACCACAGCTGCTGAGCCTTCACCACACGCT 105129 Query 213694 TGACAGCTCCGGGCGTAGCCTCGTA-CTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAG 213752 |||| |||| | | |||||| ||| | ||||||||| | || || | |||||| Sbjct 105128 TGAC-CCTCCCCTCCT--TCTCGTATCTGGT-GTAGAGCTCCTCAAACTCCTCCCCCCAG 105073 Query 213753 ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCA-TCTCT 213811 | |||||| || || ||| || |||||||| ||| |||||| | | | |||| Sbjct 105072 CACTCGTCCAGCCCGGGGCAGTCGGCCGGACACATCAGGGACCAGTCTTCATTATTCTC- 105014 Query 213812 GACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCT 213871 || |||| |||||| ||||| |||| |||||| ||| ||| |||||||| | | | Sbjct 105013 CACCCTCTTCATGAAGAGGTCAGGGATCCACAGGGCGTAGAAAAGGTCCCTCGCTCGCTG 104954 Query 213872 CTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGG 213931 ||| ||| ||| | ||| || ||| || || |||||||| | || ||||| || Sbjct 104953 CTCTTCCTTTCCCGTGTTCTTCTTCAGCTCCAGGAAGTCAAACACATCAAAATGCCAGGG 104894 Query 213932 CTCCATGTAGATGGCAAAGGCGCCCGGCC---TCTTGCCGCCCTGGTCCACCAGCCTGGC 213988 ||||| ||| ||||| ||||| || || | | ||||| |||||||| || | || Sbjct 104893 CTCCAGGTACATGGCGAAGGCTCCGGGTCTTTTGTTGCCCCCCTGGTCGACGTAACGTGC 104834 Query 213989 CACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGC 214048 ||||| ||| | ||| | ||| || ||||| ||||| |||||||| || || Sbjct 104833 AGTGTTGTTGTAGACCCTCAGCATGGGGACGAGCCCATTGGAGCAGCCGTTGGTGCCAGC 104774 Query 214049 TATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTT 214108 || || || | | || | | ||| | | | || || || ||||| | || Sbjct 104773 GATGTAGCTCCCTGTTGATCTGATGCAGCTGACCGCTACRCCGATTCCGCCGGCCGATTT 104714 Query 214109 GGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAG 214168 |||||| | |||||| || ||| || || |||||| | |||||||| || | | Sbjct 104713 GGAGATGAGGGCGCATTGCTTCAGTGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCAT 104654 Query 214169 GTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGG 214228 |||| ||||||||| || ||||| |||||| | |||| ||||| || || || Sbjct 104653 TGCAAGCAGGAAGCAGCTAGACAGCTGTGGCCTGTTGGTTCCAGCATTGAAGAGGGTTGG 104594 Query 214229 GCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGAT 214288 ||| ||| | | |||| | || || || |||||||||| | | ||| | ||| Sbjct 104593 AGAGGCGTGGGTGAACCACTTCTCCGACAGCAGGTTGTAGGTCTCGATGGCTGCGTCGAT 104534 Query 214289 GTCGTGCTTGTGGATCTGTAGAGCGCAC-CTCATCAGCATGTGCTGGGGCCTCTCTATGG 214347 || | |||||| | || ||| ||||| |||||||| || |||| ||| | Sbjct 104533 ATCCGTCCCGTGGATTCCCACGGC-CACTCTCATGAGCATGTGTTGCGGCCGCTC--AGC 104477 Query 214348 GTCCTT--TGGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTAGGA 214405 |||| || ||| ||||||||||||||||||||||||||||| || ||| || Sbjct 104476 CACCTTGCTGTCAATCTTCAGCAGGTAGGAGCGCTCCAGAGTCTTGAAGCCGAAGAAGTT 104417 Query 214406 GTAGG 214410 ||||| Sbjct 104416 GTAGG 104412 >seq1028 Length=1389237 Score = 190 bits (210), Expect = 4e-43 Identities = 189/245 (77%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 241389 GCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCC 241448 |||| ||||| || || |||| || ||| | ||||||||||||||||||||| |||| Sbjct 1126030 GCTGGCAGCCACTGCTCACGTGCGTCATGACTTTCTGTTTGAGTTGGGCCACCTGTTCCC 1125971 Query 241449 GCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCT 241508 |||| | |||||| || || |||||||| |||||||||| || ||||| || || || | Sbjct 1125970 GCAGCATGGACGCTGTGTTTGACAGTCCAGCGTTGTCAGTTTTCAGCACTTTAACCTTGT 1125911 Query 241509 CCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGT 241568 | ||||| || |||||||| ||||||||||||| || || || | ||||| | |||| Sbjct 1125910 CTTCCAGACGGGCGATGCGCTCCAGTTTGCGCCTCCGACACTTCGAAGCTGCGAGCCGGT 1125851 Query 241569 TCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGACT 241628 ||| || | |||||| ||||| || || || ||||| | ||||| || | |||||| Sbjct 1125850 TCCTCAGCCGCTTACGCTCCGCTTTCATCCGCTCCTGATTCTCCAAATCAACAGGAGACA 1125791 Query 241629 TGGGT 241633 ||||| Sbjct 1125790 TGGGT 1125786 Score = 89.7 bits (98), Expect = 1e-12 Identities = 88/115 (77%), Gaps = 8/115 (7%) Strand=Plus/Minus Query 238926 TCTGTTTGAGTTGGGCCACCCGGTCCCGCAGAACGGACGCGGTATTGGACAGACCCGCGT 238985 |||||||||||||||||||| | |||||||| | |||||| || || ||||| || |||| Sbjct 1125997 TCTGTTTGAGTTGGGCCACCTGTTCCCGCAGCATGGACGCTGTGTTTGACAGTCCAGCGT 1125938 Query 238986 TATCAG--------ACTTGAGCATTCTCCTCCAGCCGCGCGATGCGTTCCAGCTT 239032 | |||| |||| | | || || ||||| || |||||||| ||||| || Sbjct 1125937 TGTCAGTTTTCAGCACTTTAACCTTGTCTTCCAGACGGGCGATGCGCTCCAGTTT 1125883 >seq97 Length=2126174 Score = 183 bits (202), Expect = 6e-41 Identities = 184/239 (77%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 241389 GCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCC 241448 |||| ||||| || || ||| |||||||| ||||||||| ||||||||||| || | Sbjct 605635 GCTGGCAGCCACTGCTCACGTGTGTCAGGACCTTCTGTTTGAGCTGGGCCACCTGATCTC 605576 Query 241449 GCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCT 241508 | || || ||||| || ||||| ||||| |||||||| ||| | || ||||| |||| Sbjct 605575 GGAGCACTGACGCCGTGTTGGAGAGTCCCGCGTTGTCGTTCTTTAAAACTTTCACCTTCT 605516 Query 241509 CCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGT 241568 |||||||||| |||||||| ||||| ||||||| ||||||||||| || || | |||| Sbjct 605515 CCTCCAGCCGGGCGATGCGCTCCAGCTTGCGCCTCCGGCATTTGGTCGCGGCTAGTCGGT 605456 Query 241569 TCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 ||| || || || || ||||| ||||| |||||| ||||| ||| || || ||| Sbjct 605455 TCCTCAGCCTTTTGCGCTCCGCTTTGATCTTCTCCTGGGTCTCCAAGTCAATTGGGGAC 605397 Score = 89.7 bits (98), Expect = 1e-12 Identities = 88/115 (77%), Gaps = 8/115 (7%) Strand=Plus/Minus Query 238926 TCTGTTTGAGTTGGGCCACCCGGTCCCGCAGAACGGACGCGGTATTGGACAGACCCGCGT 238985 |||||||||| ||||||||| | || || || || ||||| || ||||| || ||||||| Sbjct 605602 TCTGTTTGAGCTGGGCCACCTGATCTCGGAGCACTGACGCCGTGTTGGAGAGTCCCGCGT 605543 Query 238986 TATC--------AGACTTGAGCATTCTCCTCCAGCCGCGCGATGCGTTCCAGCTT 239032 | || | |||| | |||||||||||||| |||||||| |||||||| Sbjct 605542 TGTCGTTCTTTAAAACTTTCACCTTCTCCTCCAGCCGGGCGATGCGCTCCAGCTT 605488 >seq465 Length=1673379 Score = 152 bits (168), Expect = 1e-31 Identities = 176/237 (74%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 241390 CTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCG 241449 ||| ||||| | | | ||| | || ||||| |||||| || || || ||||| ||||| Sbjct 357866 CTGGCAGCCGTTGGTGACGTGACTCATGACCTTCTGTTTTAGCTGAGCGACCTGCTCCCG 357807 Query 241450 CAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTC 241509 ||| | || ||||| || ||| | | ||| | ||| || |||||||| ||||| Sbjct 357806 CAGCATGGCGGCGGTGGAGGCCAGGTCCGAGTTCTGGCTCTTCAGGACCTTCACCTTCTC 357747 Query 241510 CTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTT 241569 ||||||||||| |||||| ||||| || ||| |||||| |||| || || | |||||| Sbjct 357746 CTCCAGCCGCGAGATGCGCTCCAGCTTCCGCTTGCGGCACTTGGACGCCGCGATGCGGTT 357687 Query 241570 CCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGA 241626 |||||| |||| |||||||| ||||| || ||||| ||||| ||| || || || Sbjct 357686 GCGGAGTTTCTTGCGTTCCGCTTTGATCCGCTCCTGCGTCTCCAGGTCAATTGGCGA 357630 >seq173 Length=537686 Score = 114 bits (126), Expect = 2e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474 ||||| | ||| || || |||||||| || |||| ||| | | || || || ||| Sbjct 248983 AGGACTTTCTGCTTCAGCTGGGCCACTTGCTCCCTCAGCAGGCTAGCCGTGGAGGCCAGA 249042 Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534 | | ||| | | || ||| || || || |||||||||| | ||| || |||||| Sbjct 249043 TCGGTGTTTTGGGTTTTCAGCGTTTTGACCTTGTCCTCCAGCCTGGAGATCCGCTCCAGT 249102 Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594 ||||||| || || |||| |||||| | ||||||| ||| ||||| | || || ||| Sbjct 249103 TTGCGCCTCCGACACTTGGAGGCTGCAATTCGGTTCCTGAGCCTCTTCCTCTCGGCTTTG 249162 Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 ||||| ||||| |||||||| ||||||||| Sbjct 249163 ATGCGCTCCTGAGAGTCCATGTCTATCGGAGAC 249195 >seq913 Length=88738 Score = 111 bits (122), Expect = 3e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 ||||| | |||||||||| ||||||||||| || || ||||| | ||||||| || Sbjct 60972 TCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCCGGCATCAGGCCCCTCTTCTTC 60913 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273 |||||||| || || || || ||||||||||||||||| |||||||| || ||||| || Sbjct 60912 AGCCAGAAGATGGCGGCAAAGGAGCCAGAGAAGAAGATCCCCTCCACGGCGGCGAAAGC 60854 Score = 111 bits (122), Expect = 3e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 ||||| | |||||||||| ||||||||||| || || ||||| | ||||||| || Sbjct 73467 TCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCCGGCATCAGGCCCCTCTTCTTC 73526 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273 |||||||| || || || || ||||||||||||||||| |||||||| || ||||| || Sbjct 73527 AGCCAGAAGATGGCGGCAAAGGAGCCAGAGAAGAAGATCCCCTCCACGGCGGCGAAAGC 73585 Score = 87.8 bits (96), Expect = 3e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || ||||| | ||||| |||||||| ||||| ||||||| ||||||||||| Sbjct 62452 CTGGTACTCGCCCACCCGCTTCTCGAAGAAGTTGGTCTTTCCCTCCAGAGAGATGTTCTC 62393 Query 47899 CATGAAGAGGAAGGGGTT 47916 ||||||| ||||||||| Sbjct 62392 CATGAAGTCGAAGGGGTT 62375 Score = 87.8 bits (96), Expect = 3e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || ||||| | ||||| |||||||| ||||| ||||||| ||||||||||| Sbjct 71987 CTGGTACTCGCCCACCCGCTTCTCGAAGAAGTTGGTCTTTCCCTCCAGAGAGATGTTCTC 72046 Query 47899 CATGAAGAGGAAGGGGTT 47916 ||||||| ||||||||| Sbjct 72047 CATGAAGTCGAAGGGGTT 72064 >seq455 Length=2495804 Score = 111 bits (122), Expect = 3e-19 Identities = 91/111 (82%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 38960 CACCAGCTCCCACCTGTTGGCGGAGAAGAGCAGGTGGACTGCGTGGTCGTCCAGCTCCGT 39019 |||||||||||| | ||| || ||||| |||| ||| || | |||||| ||||| || | Sbjct 1400441 CACCAGCTCCCAGCGGTTTGCAGAGAACAGCAAGTGCACCGTGTGGTCCTCCAGATCACT 1400500 Query 39020 CTTACTCTCCAGGTACGAGCTGATCATCTTTCCGATGGTAGTGGTTCTGTC 39070 ||| |||||||||||| |||||||| ||||||||| || ||||| ||||| Sbjct 1400501 CTTCTTCTCCAGGTACGCGCTGATCAGCTTTCCGATCGTCGTGGTCCTGTC 1400551 Score = 95.1 bits (104), Expect = 2e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 39070 CGGGGAACCTCATCAGCTCGGCCGGTCTCCCGCTACCTTGCAGAGCCTCCACCAGCTTTT 39129 ||||||||||||||| ||| ||||| || ||||| |||||||||| |||||| | Sbjct 1400640 CGGGGAACCTCATCATCTCCGCCGGCCTGCCGCTCTGCTGCAGAGCCTGAACCAGCCTGC 1400699 Query 39130 GACACTGTGTGGTCTTTCCAGCCCTGTCCACTCCTTCCAATACCACAAGAGCTCCCCTCT 39189 ||||| |||||||| || ||||||||||| || |||| || | || || || |||| Sbjct 1400700 TGCACTGGGTGGTCTTCCCGGCCCTGTCCACCCCCTCCAGCACGATCAGCGCGCCTCTCT 1400759 Query 39190 TC 39191 || Sbjct 1400760 TC 1400761 >seq84 Length=1470437 Score = 107 bits (118), Expect = 4e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 241418 ACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGTCCT 241477 |||| ||| || || ||||||||||| || |||| | | ||||| | || | Sbjct 1058591 ACCTTCTGCTTCAGCTGGGCCACCTGCTCGCGCAACATGTTGGCGGTGGATGCGAGCTCG 1058532 Query 241478 GCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTG 241537 | ||| | ||||| || ||||||||| |||||||||| || ||| | ||||| || Sbjct 1058531 GAGTTCTGTGACTTTAGGGTCTTCACTTTATCCTCCAGCCTCGAGATCCTCTCCAGCTTC 1058472 Query 241538 CGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATG 241597 | |||||||||| ||| || | |||||||| | | ||| | || ||||||||| Sbjct 1058471 CTTTTCCGGCATTTGGAGGCAGCGATGCGGTTCCTCATCCGCTTTCTCTCAGCCTTGATG 1058412 Query 241598 CGTTCCTGGTCCTCCATGTCGATCGGAGA 241626 || |||||| |||||||||||| || || Sbjct 1058411 CGCTCCTGGCTCTCCATGTCGATTGGGGA 1058383 >seq34 Length=1455329 Score = 96.9 bits (106), Expect = 6e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977 |||||| || ||||| |||||||| | ||| | ||| ||||| | ||| ||| Sbjct 918613 CTGGAACTCTCCTGAAAGCACCCTGCGGGTGTAGATGTTGCTGGTGTATGCCTCAATGGA 918672 Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACT 213037 ||| ||||| ||||| ||||| |||||| ||||||||||| || |||| |||||||| Sbjct 918673 CTCATTGTTGCCCAGGATCTGGGCAGTGGAAGCTGTGGGCATTGGGGCCAAAAGGAGACT 918732 Query 213038 GTTCCTCACTCCGTGC 213053 |||||||| || ||| Sbjct 918733 ATTCCTCACACCATGC 918748 >seq292 Length=2496335 Score = 95.1 bits (104), Expect = 2e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 241418 ACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGTCCT 241477 |||| ||| || || || ||||| || |||| || ||| || ||| || || | Sbjct 622229 ACCTTCTGCTTCAGCTGTGCCACTTGCTCCCTGAGGACGCTGGCTGTAGAGGCCAACTCG 622170 Query 241478 GCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTG 241537 | ||| | | || || ||| || || ||||||||||| | ||| | |||||||| Sbjct 622169 GTGTTCTGCGTTTTCAGGGTCTTGACCTTGTCCTCCAGCCGAGAGATCCTCTCCAGTTTT 622110 Query 241538 CGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATG 241597 | | ||| ||||||| ||| || | | ||| || || |||| | |||||||||||| Sbjct 622109 CTCTTGCGACATTTGGAGGCAGCTATCCTGTTGCGCAGCTTCTTTCTCTCCGCCTTGATG 622050 Query 241598 CGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 || || |||| |||||||| || |||||| Sbjct 622049 CGCTCTTGGTTGTCCATGTCAATGGGAGAC 622020 >seq1698 Length=2458952 Score = 93.3 bits (102), Expect = 8e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 ||||||| ||| |||||| |||||||| || || |||||||| | ||||||| || Sbjct 826485 TCGTCCCTGCTAATGAGCTCGTTGGAGTAGGTAAGTCCAGGCATTAGGCCCCTCTTCTTT 826426 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273 | |||| | || || || || || ||||||||||| ||||||||||| || || || || Sbjct 826425 AACCAGTAGATAGCAGCAAATGAACCAGAGAAGAAAATGCCCTCCACAGCTGCAAAAGC 826367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931455517710080