Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphilophus_20citrinellus_20[genbank_20GCA_5F000751415.1_202014-09- 07] 6,637 sequences; 844,902,565 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1696 96.9 1e-14 >seq1696 Length=952724 Score = 96.9 bits (106), Expect = 1e-14 Identities = 303/462 (66%), Gaps = 11/462 (2%) Strand=Plus/Minus Query 155292 CGGCTAATATCATTACTCTTTTCCAGAGCCGCAAAATAAATTGTCTCAAAGATATATTTA 155351 ||||||| ||| |||| |||||||| || | ||||| ||||||||||| | | Sbjct 105629 CGGCTAAC-TCACAACTCGCCTCCAGAGCAGCGTAGTAAATGGTCTCAAAGATTTGGATG 105571 Query 155352 TTGACTGTTTTAGCCTCCTCAGATGTAAATGCGATATC-CATCTTGAAAAATGTGTCGGC 155410 |||| | |||||| | ||||| |||| | |||| || ||| | ||| || Sbjct 105570 TTGAGCAGCTGAGCCTCAGGGCTTTCAAATG-GATAACGCATCAGGATAAAGGCGTCAGC 105512 Query 155411 TAAACCCTGAACTCCAATACCGACTGGGCGATGCCTGTAATTGCTCCTGCTTGTCTTCTT 155470 || || || |||||||| || | ||| | || | ||| ||| |||| | |||| Sbjct 105511 CAATCCTTGGACTCCAATTCCTATTGGCCTGTGGCGCATATTAGACCT-CTTGGCCTCTT 105453 Query 155471 -GTTTGGGTAAAAATTCACATCAATAATGTTATTTAAATTTGTAACCAATACCTTGGTTA 155529 |||||| | || | || ||||| || ||||| ||| | || | ||| ||||| | Sbjct 105452 CCACTGGGTAGTAGTTTATGTCGATAATCTTGTTTAAGTTTCTGACAATTACTTTGGTCA 105393 Query 155530 CGTCTGCTAATTTCACATAGTCAAATGTTTTATCCTCATTTACAAACATACCAAGACCAA 155589 | ||| | ||| | ||||| | || || | || |||| ||| | | Sbjct 105392 CAGATGCCAGTTTTTTAAAGTCATAAGTCCGCTCAGGTGTGACGTACATGTTGAGAGCGA 105333 Query 155590 TAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGC---TGTATTCTACAATCTCAC 155646 | || |||||||| || | ||| | ||| ||| | || ||||||| || || || Sbjct 105332 TGGAGGCCAGATTGCAGA---CAGCCACCTCGTCCTTGCTGGTGTATTCGACGATTTCTG 105276 Query 155647 AGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAG 155706 ||| ||||| | ||||||||| || | ||||| |||||| || ||||| || | Sbjct 105275 TGCAGAGGTTGCTGCACTTGATGGTCCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGG 105216 Query 155707 CATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTG 155748 | || ||||| || ||||| || || || || || |||||| Sbjct 105215 CRTCTTTGTACAGCATGTACGGCGTCCCAGTTTCTGTCTGTG 105174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471692441690669