Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphilophus_20citrinellus_20[genbank_20GCA_5F000751415.1_202014-09- 07] 6,637 sequences; 844,902,565 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq236 100 3e-16 >seq236 Length=2731030 Score = 100 bits (110), Expect = 3e-16 Identities = 127/172 (74%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 || || ||||| || | |||||||| | || ||||||| ||| |||| ||||| Sbjct 1740028 AGTATCTGGGGCCCAACATGCGATGGTCTTGACCGCATTGTCGAGCAGTGTAGCCTGCCC 1739969 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAG- 21243 || || || |||||||||||| | | |||||||||||||| ||||||| || | ||| Sbjct 1739968 GACCTCCAGGTGGGCGACTGGTTGGTGTTTGAAAACATGGGGGCTTACA-CTGTGGCAGC 1739910 Query 21244 CTCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTCA 21295 ||| || ||||| |||||||||| | || || | ||||| || || ||| Sbjct 1739909 CTCCTCCACCTTCAACGGCTTCCAGAGACCCGACATCCACTACGTCATGTCA 1739858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463507143098160