Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphilophus_20citrinellus_20[genbank_20GCA_5F000751415.1_202014-09- 07] 6,637 sequences; 844,902,565 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq1529 104 4e-17 seq1061 95.1 2e-14 >seq1529 Length=688786 Score = 104 bits (114), Expect = 4e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 58369 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGT 58428 ||||||| ||| | ||||||||||| | || ||||| | || | ||| |||||||| Sbjct 587367 GATAGCCTCAGCTCTTTGGTGGTACTACGTCTCCAAAGGAGTGGAGTTCTTGGATACAGT 587308 Query 58429 GTTTTTCATACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTT 58488 ||||||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| | Sbjct 587307 CTTTTTCATACTGAGGAAGAAGTTCAATCAAGTCAGCTTCCTCCACGTCTACCATCACTG 587248 Query 58489 TACTATGTTTACTTTAGGATGGGTAGGTATTAAATGG 58525 || ||||| | | | ||| | || || |||||| Sbjct 587247 CACCATGTTCATCCTCTGGTGGATTGGAATCAAATGG 587211 >seq1061 Length=1507073 Score = 95.1 bits (104), Expect = 2e-14 Identities = 123/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 58371 TAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGT 58430 |||| |||| | |||||||| | ||| || || || || ||||| | || || |||| Sbjct 444961 TAGCGGGAGCTCTGTGGTGGTATTTTATCTCCAAGGGCATTGAATATCTGGACACTGTGT 444902 Query 58431 TTTTCATACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTA 58490 ||||||| || || ||||| || || || |||| ||| || ||||| || || |||| | Sbjct 444901 TTTTCATCCTGAGAAAAAAATTCAACCAGGTTACCTTCCTGCACGTCTACCACCATTGCA 444842 Query 58491 CTATGTTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540 ||||| || | | ||| | || || |||||| | |||||||| ||| Sbjct 444841 GCATGTTCACACTCTGGTGGATTGGCATCAAATGGGTGGCAGGAGGACAG 444792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903336250748320