Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphilophus_20citrinellus_20[genbank_20GCA_5F000751415.1_202014-09- 07] 6,637 sequences; 844,902,565 total letters Query= NC_031047.1 Length=170770 Score E Sequences producing significant alignments: (Bits) Value seq4683 93.3 5e-14 >seq4683 Length=1485 Score = 93.3 bits (102), Expect = 5e-14 Identities = 91/113 (81%), Gaps = 6/113 (5%) Strand=Plus/Plus Query 1088 CGCTCTACCAAACTGAGCTACACGGAGTAAATTAAATTTGAGCGGATAATGAGAATCGAA 1147 ||||||||||| |||||||| | || | || || |||||| | || |||||||| Sbjct 828 CGCTCTACCAA-CTGAGCTATATC-AGCACATC---TTGGAGCGGGCAGTGGGAATCGAA 882 Query 1148 CTCACATCATCAGATTGGAAGTCTGAGGTAATA-CCATTATACGATATCCGCA 1199 | ||||||||||| ||||||| ||||||||||| |||||||||||| ||||| Sbjct 883 CCCACATCATCAGCTTGGAAGGCTGAGGTAATAGCCATTATACGATGCCCGCA 935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546290674599600