Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq487837 122 7e-23 seq1686 113 4e-20 >seq487837 Length=248 Score = 122 bits (134), Expect = 7e-23 Identities = 156/216 (72%), Gaps = 12/216 (6%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| |||| ||||||||||| || ||||| ||||| | |||||| || | || Sbjct 242 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 183 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||| ||||| ||| | || || ||||||||||| ||| | |||||||||||| Sbjct 182 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCC 123 Query 21084 GCGATCTT----TTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAAT 21139 |||||| || | ||| | || || | ||||||| |||| ||| || Sbjct 122 TGGATCTTGGCCTTTTCTCA--------ATGGTGTCGCTGGGCTCCACCTCCAGGGTGAT 71 Query 21140 GGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||||||| || | || ||||| || || ||||| Sbjct 70 GGTCTTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 35 >seq1686 Length=76845 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || || || || |||||||| ||||| | ||| || || | || |||||||||||||| Sbjct 57410 GTTGATTCTTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCTTCCAGCTGTTTGCCA 57469 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || ||||||||||| || | |||||||||||| |||||| || Sbjct 57470 GCGAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTG 57529 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | || |||| ||||||| |||| ||| ||||||||||| || | ||| Sbjct 57530 ACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTT 57589 Query 21159 TTGACAAATATTTGCAT 21175 || ||||| || ||||| Sbjct 57590 TTCACAAAGATCTGCAT 57606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419680150065968