Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1095 98.7 7e-16 >seq1095 Length=300654 Score = 98.7 bits (108), Expect = 7e-16 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 97115 CAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCC 97174 |||||| ||||||||||| | || | || | |||||| || ||||| || ||||| | Sbjct 3073 CAGTGATGTGGGCGATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGCACAC 3014 Query 97175 CTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACAT 97234 ||| ||||| || | || | || || | ||| ||||| |||| ||||||||||||| Sbjct 3013 CTAACCCCATGTCTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCACACACAT 2954 Query 97235 AAAACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 | ||||| | || | || |||||||||| ||||| Sbjct 2953 AGAACTGGCACAGGGCGTGGCAGGGGGGCAGGGCCAT 2917 Score = 82.4 bits (90), Expect = 5e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 ||||| || ||||| || ||||| ||||| || |||||||| || | ||| ||||| || Sbjct 2289 TATTCAGCACCAAAGTGTCTCCACTGGAAACCGTAAACAGGGCCCAAGTCCCCTTCCTCC 2230 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGC 97521 || | | || ||| ||| || ||| | | |||||||||||||||||||| | | Sbjct 2229 CTGTTAGTAAATCCACTCTTGTCCAAAAAATCACGGGATCCATTTGCATCCCAAATTTTC 2170 Query 97522 ACACC 97526 ||||| Sbjct 2169 ACACC 2165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 344665933058360