Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq643 107 2e-18 seq1991 105 8e-18 seq161 105 8e-18 seq1302 102 9e-17 seq18337 98.7 1e-15 seq481616 93.3 5e-14 seq346054 93.3 5e-14 seq410 91.5 2e-13 seq271712 89.7 6e-13 seq3336 89.7 6e-13 seq7210 84.2 2e-11 >seq643 Length=420264 Score = 107 bits (118), Expect = 2e-18 Identities = 71/79 (90%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct 338330 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 338389 Query 60124 TATACTACCGAGGATTGAA 60142 ||||||| |||||| |||| Sbjct 338390 TATACTAACGAGGAGTGAA 338408 >seq1991 Length=136076 Score = 105 bits (116), Expect = 8e-18 Identities = 70/78 (90%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 85240 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 85181 Query 60126 TACTACCGAGGATTGAAT 60143 ||||| ||||||||| || Sbjct 85180 TACTAACGAGGATTGCAT 85163 >seq161 Length=734017 Score = 105 bits (116), Expect = 8e-18 Identities = 72/81 (89%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct 18700 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 18759 Query 60124 TATACTACCGAGGATTGAATA 60144 ||||||| |||||| || ||| Sbjct 18760 TATACTAACGAGGAGTGCATA 18780 >seq1302 Length=144650 Score = 102 bits (112), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 55879 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 55820 Query 60126 TACTACCGAGGATTGA 60141 ||||| |||||| ||| Sbjct 55819 TACTAACGAGGAGTGA 55804 Score = 96.9 bits (106), Expect = 4e-15 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | ||||| || | |||||| |||||| ||||||||||||||||||||| |||| Sbjct 55606 AAAAAGTATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 55665 Query 60117 TCACCACTATACTACCGAGGA 60137 | |||||||||||| |||||| Sbjct 55666 TGACCACTATACTAACGAGGA 55686 >seq18337 Length=5131 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 494 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 435 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 434 TACTAACGAGGA 423 >seq481616 Length=4056 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||| Sbjct 568 TTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 627 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 628 TATACTAACGAGGA 641 >seq346054 Length=1115 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||| Sbjct 306 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGGCCAC 247 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 246 TATACTAACGAGGA 233 >seq410 Length=214697 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 2455 TCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 2396 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 2395 ATACTAACGAGGA 2383 >seq271712 Length=1271 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | ||||||||||||| |||| |||||||||||||||| ||||| |||| Sbjct 1117 TTCTCCCCGTCGGGGAATCGAACCCCGGTCACCCGCGTGACAGGCGGGGATACTGGCCAC 1058 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 1057 TATACTAACGAGGA 1044 >seq3336 Length=68730 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 32102 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 32043 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 32042 TACTAACGAGGA 32031 >seq7210 Length=19495 Score = 84.2 bits (92), Expect = 2e-11 Identities = 74/90 (82%), Gaps = 3/90 (3%) Strand=Plus/Minus Query 60076 GGGAATCGAACCCT-GGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGA 60134 |||||| |||||| ||||||||||||||||||||| ||||| |||||||||||| ||| Sbjct 16225 GGGAATTGAACCCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTAACGA 16166 Query 60135 GGATTGAATATATAACTTGAATATTACAAT 60164 ||| ||| ||| | | | ||||| |||| Sbjct 16165 GGA--GAAGATACAGCATAAATATGCCAAT 16138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568235534417440