Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20]
501,148 sequences; 1,018,701,900 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq643 107 2e-18
seq1991 105 8e-18
seq161 105 8e-18
seq1302 102 9e-17
seq18337 98.7 1e-15
seq481616 93.3 5e-14
seq346054 93.3 5e-14
seq410 91.5 2e-13
seq271712 89.7 6e-13
seq3336 89.7 6e-13
seq7210 84.2 2e-11
>seq643
Length=420264
Score = 107 bits (118), Expect = 2e-18
Identities = 71/79 (90%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 338330 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 338389
Query 60124 TATACTACCGAGGATTGAA 60142
||||||| |||||| ||||
Sbjct 338390 TATACTAACGAGGAGTGAA 338408
>seq1991
Length=136076
Score = 105 bits (116), Expect = 8e-18
Identities = 70/78 (90%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 85240 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 85181
Query 60126 TACTACCGAGGATTGAAT 60143
||||| ||||||||| ||
Sbjct 85180 TACTAACGAGGATTGCAT 85163
>seq161
Length=734017
Score = 105 bits (116), Expect = 8e-18
Identities = 72/81 (89%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 18700 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 18759
Query 60124 TATACTACCGAGGATTGAATA 60144
||||||| |||||| || |||
Sbjct 18760 TATACTAACGAGGAGTGCATA 18780
>seq1302
Length=144650
Score = 102 bits (112), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 55879 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 55820
Query 60126 TACTACCGAGGATTGA 60141
||||| |||||| |||
Sbjct 55819 TACTAACGAGGAGTGA 55804
Score = 96.9 bits (106), Expect = 4e-15
Identities = 70/81 (86%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| | ||||| || | |||||| |||||| ||||||||||||||||||||| ||||
Sbjct 55606 AAAAAGTATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 55665
Query 60117 TCACCACTATACTACCGAGGA 60137
| |||||||||||| ||||||
Sbjct 55666 TGACCACTATACTAACGAGGA 55686
>seq18337
Length=5131
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 494 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 435
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 434 TACTAACGAGGA 423
>seq481616
Length=4056
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||
Sbjct 568 TTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 627
Query 60124 TATACTACCGAGGA 60137
||||||| ||||||
Sbjct 628 TATACTAACGAGGA 641
>seq346054
Length=1115
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct 306 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGGCCAC 247
Query 60124 TATACTACCGAGGA 60137
||||||| ||||||
Sbjct 246 TATACTAACGAGGA 233
>seq410
Length=214697
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 2455 TCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 2396
Query 60125 ATACTACCGAGGA 60137
|||||| ||||||
Sbjct 2395 ATACTAACGAGGA 2383
>seq271712
Length=1271
Score = 89.7 bits (98), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | ||||||||||||| |||| |||||||||||||||| ||||| ||||
Sbjct 1117 TTCTCCCCGTCGGGGAATCGAACCCCGGTCACCCGCGTGACAGGCGGGGATACTGGCCAC 1058
Query 60124 TATACTACCGAGGA 60137
||||||| ||||||
Sbjct 1057 TATACTAACGAGGA 1044
>seq3336
Length=68730
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||| |||||||||||||||| ||||| ||||||
Sbjct 32102 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 32043
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 32042 TACTAACGAGGA 32031
>seq7210
Length=19495
Score = 84.2 bits (92), Expect = 2e-11
Identities = 74/90 (82%), Gaps = 3/90 (3%)
Strand=Plus/Minus
Query 60076 GGGAATCGAACCCT-GGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGA 60134
|||||| |||||| ||||||||||||||||||||| ||||| |||||||||||| |||
Sbjct 16225 GGGAATTGAACCCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTAACGA 16166
Query 60135 GGATTGAATATATAACTTGAATATTACAAT 60164
||| ||| ||| | | | ||||| ||||
Sbjct 16165 GGA--GAAGATACAGCATAAATATGCCAAT 16138
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 568235534417440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |