Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1686 131 1e-25 seq487837 109 4e-19 >seq1686 Length=76845 Score = 131 bits (144), Expect = 1e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236 ||| |||||||| | || ||||||||| ||||||||||||||||| |||| | || Sbjct 57394 CAGGACCAGGTGAAGGGTTGATTCTTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATC 57453 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296 |||| ||| ||||| ||||| || |||| ||||||||| || | || |||||||| Sbjct 57454 TTCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTC 57513 Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||||| ||| | || | || | || | | || || |||| |||||||| Sbjct 57514 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 57573 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCG 34391 ||||| || || |||||||||||||||||||||| Sbjct 57574 CTTGCCAGTCAGGGTTTTCACAAAGATCTGCATCG 57608 >seq487837 Length=248 Score = 109 bits (120), Expect = 4e-19 Identities = 153/213 (72%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236 |||||||| ||| | || || ||||| ||||||||||||||||| ||| | || Sbjct 243 CAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATC 184 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296 |||| ||||||||| || || || |||| ||||||||| ||| | || |||||||| Sbjct 183 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 124 Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||||| |||| || | || | ||| | | || || |||| |||||||| Sbjct 123 CTGGATCTTGGCCTTT---TC-TCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGT 68 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| ||||| || || || ||||||||||| Sbjct 67 CTTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 35 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 321098759818880