Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1095 89.7 4e-13 >seq1095 Length=300654 Score = 89.7 bits (98), Expect = 4e-13 Identities = 131/184 (71%), Gaps = 1/184 (1%) Strand=Plus/Plus Query 20104 TTTATTAAAGGA-TCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAG 20162 ||| ||| ||| ||||||||||| | ||||| || ||||| || || |||||| Sbjct 2122 TTTGTTACAGGGGTCAACAAATTCCAAAGAGCTGTCGGAGAAAGGTGTGAAAATTTGGGA 2181 Query 20163 CGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACCGTCAAGAGGGGGA 20222 ||| ||||||| | ||||| ||| | ||||||| ||| | | || ||||| Sbjct 2182 TGCAAATGGATCCCGTGATTTTTTGGACAAGAGTGGATTTACTAACAGGGAGGAAGGGGA 2241 Query 20223 TTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAA 20282 ||||| ||||| || || || || |||||||| ||||| |||||||| |||||| | Sbjct 2242 CTTGGGCCCTGTTTACGGTTTCCAGTGGAGACACTTTGGTGCTGAATACAAAGACATGCA 2301 Query 20283 CACA 20286 | || Sbjct 2302 CTCA 2305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396745887416860