Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq374181 89.7 1e-12 seq279539 86.0 1e-11 >seq374181 Length=640 Score = 89.7 bits (98), Expect = 1e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 254201 CTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCA 254260 ||| || || || ||| || | |||||||||||||||||| ||||||||| || ||||| Sbjct 581 CTGCCCCCCGTTTAAGATCATCATCCTGGACGAGGCGGACTCCATGACGGGCGCGGCGCA 522 Query 254261 GTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTG 254320 | | || ||||| || || ||||||| | | || ||||| || ||||| | || Sbjct 521 GGCTGCTCTCCGGCGCACCATGGAGAAGGAGTCGCGAACCACGCGCTTCTGCCTCATCTG 462 Query 254321 CAACTACGT 254329 ||||||||| Sbjct 461 CAACTACGT 453 >seq279539 Length=228 Score = 86.0 bits (94), Expect = 1e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 249271 GGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTG 249330 ||| ||||||||||||| |||| |||||| || || || ||||||||||| || Sbjct 206 GGGGCGTTCGCCATGTACCTGGAGCCCTGGCACTTTGACATCTTCGAGTTCCTGGAGCTG 147 Query 249331 AAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTC 249390 || ||||||| || || ||| | | || || ||||||||||||| ||| ||| || Sbjct 146 AAGAAGAACACGGGGAAGGAGGAGCAGCGGGCTCGCGACCTCTTCTACGCCCTCTGGATC 87 Query 249391 TCCGACTTGTTCATG 249405 ||||| | |||||| Sbjct 86 CCCGACCTCTTCATG 72 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1066871790238464