Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq422119 136 3e-27 seq1686 113 4e-20 seq487837 82.4 7e-11 seq10365 82.4 7e-11 >seq422119 Length=456 Score = 136 bits (150), Expect = 3e-27 Identities = 125/158 (79%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 23047 CACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGT 23106 ||||||||| ||| |||||||| || || ||||| || || ||||| ||||| || || Sbjct 112 CACCTCGTCCTTGCTGGTGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGATGGT 171 Query 23107 GCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGT 23166 ||||| || ||||||||| || || ||||| | |||||||| |||||||| ||||| Sbjct 172 GCCCAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGCGTCCTTGTACAGCATGTAGGGCGT 231 Query 23167 GCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACA 23204 ||||||||| |||||||||||||| ||| ||||| Sbjct 232 GCCCGTCTCCGTCTGCGACTCGATGACCGCGTACCACA 269 >seq1686 Length=76845 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || || || ||||| ||||| || |||||| | || || || || Sbjct 57606 ATGCAGATCTTTGTGAAAACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 57547 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || ||||||||||||| | || || |||||| Sbjct 57546 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAG 57487 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || ||||||||||||||| ||||||| ||| || ||| || ||| Sbjct 57486 CAGAGGCTGATCTTCGCTGGCAAACAGCTGGAAGATGGCCGTACTCTGTCCGACTACAAC 57427 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| |||||||| || ||||| ||||| || Sbjct 57426 ATTCAGAAAGAATCAACCCTTCACCTGGTCCT 57395 >seq487837 Length=248 Score = 82.4 bits (90), Expect = 7e-11 Identities = 151/221 (68%), Gaps = 8/221 (4%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || |||||||| || |||||| | || || || || Sbjct 34 CATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 93 Query 31252 CGACAGTGTCGA--AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||| | || || || ||| || ||||||||||||| | || || ||| Sbjct 94 CGACACCATTGAGAAAAGGCCAAG------ATCCAGGACAAGGAAGGCATTCCCCCAGAC 147 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||| | || || || || ||||| ||| ||||||| || || ||| || Sbjct 148 CAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTAC 207 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 ||||| || || || || || || || |||| || |||| Sbjct 208 AACATCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGACT 248 >seq10365 Length=12387 Score = 82.4 bits (90), Expect = 7e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 23624 CCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCC 23683 || ||||| ||| | ||||| || || | ||||| || ||||| ||||||||||||||| Sbjct 598 CCGATGCCCCCGGCGGATTTGGAGATGAGGGCGCACTGCTTCAGCGTGTCGTAGATGCCC 657 Query 23684 TCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACA 23718 ||||||||||| || || | || | || |||||| Sbjct 658 TCGATGCTGTCGTCCTTCATGGCCAGCAGGAAACA 692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 442973963252160