Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20]
501,148 sequences; 1,018,701,900 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq1686 111 2e-19
seq487837 95.1 1e-14
>seq1686
Length=76845
Score = 111 bits (122), Expect = 2e-19
Identities = 159/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 139541 CCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATT 139600
|||| | ||||| || | ||||| || || ||||| |||||||| || ||| ||
Sbjct 57383 CCTCTAAGACGCAGGACCAGGTGAAGGGTTGATTCTTTCTGAATGTTGTAGTCGGACAGA 57442
Query 139601 GTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATG 139660
|| | ||||| |||||||| ||||| ||||||| | ||||| || ||||| |||
Sbjct 57443 GTACGGCCATCTTCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGAATG 57502
Query 139661 CCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCA 139720
||||| ||||| ||| || || | | || | ||||| |||||||||||||
Sbjct 57503 CCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCC 57562
Query 139721 ACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
| ||| | |||||||| |||| ||||| || || || |||||
Sbjct 57563 AGGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 57606
>seq487837
Length=248
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609
|||| || ||||| | || ||||| || || ||||| || ||| || ||||
Sbjct 245 CGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA 186
Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669
||||| ||||| || || ||| ||||||| | ||||| || || || |||||||| |||
Sbjct 185 TCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTG 126
Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729
|| ||| || ||| || | |||||| ||||||||||||| | ||| |
Sbjct 125 TCCTGGATCTTGGCCTTTTC----TCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATG 70
Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||||||| || | || || ||||| || |||||
Sbjct 69 GTCTTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 35
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 492956481481600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |