Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq1736 96.9 3e-15 >seq1736 Length=128588 Score = 96.9 bits (106), Expect = 3e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953 |||||||||| || || || ||||| || || || | || ||||||| || | || | Sbjct 22265 CCTCATCTCTGCTGATCAGCTCGTTGGAGAACGTGAGACCAGGCATCAGACCCCTCTTCT 22324 Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013 | ||||| || || | |||||| ||||| || ||||| ||||| |||||||||||||| | Sbjct 22325 TCAACCAGAAGATGGAAGCAAACGACCCAGAGAAGAAGATTCCTTCAACTGCAGCAAAGG 22384 Query 14014 CTA 14016 ||| Sbjct 22385 CTA 22387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476722815903200