Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20]
501,148 sequences; 1,018,701,900 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq1736 111 2e-19
seq16493 93.3 6e-14
seq1395 93.3 6e-14
>seq1736
Length=128588
Score = 111 bits (122), Expect = 2e-19
Identities = 97/121 (80%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146
|||||||||| || || | |||||||| |||||||| || ||||| || || | ||| |
Sbjct 22265 CCTCATCTCTGCTGATCAGCTCGTTGGAGAACGTGAGACCAGGCATCAGACCCCTCTTCT 22324
Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206
| | ||| || || || ||||| || ||||| |||||||||||||| ||||| |||||||
Sbjct 22325 TCAACCAGAAGATGGAAGCAAACGACCCAGAGAAGAAGATTCCTTCAACTGCAGCAAAGG 22384
Query 42207 C 42207
|
Sbjct 22385 C 22385
>seq16493
Length=15580
Score = 93.3 bits (102), Expect = 6e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927
|||| ||||| || ||||| || || || ||| ||| | || ||||| ||||| || |
Sbjct 3299 TCCAGCCGTAGAAGTGCATGCTGGTGAGCTTGCCGTAGTTGGGCTCGGCGATGTGGATGT 3240
Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987
||| ||||| || || ||||||||||| || | ||| || ||||| || ||||| ||||
Sbjct 3239 TCAGGGACTGGCTCTGGTCGATGAAGGCCCCGCGGTCCGCGGCCATCTTGATGATGGTCT 3180
Query 70988 TTTGTGGAATTTCCCA 71003
| || | || |||||
Sbjct 3179 TCTGGGAGATCTCCCA 3164
>seq1395
Length=115546
Score = 93.3 bits (102), Expect = 6e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146
|||||||||| || || | || ||||| | |||||||||||||| ||||| | ||| |
Sbjct 12894 CCTCATCTCTGCTGATAAGCTCATTGGAGTAGGTGAGTCCGGGCATGAGGCCTCTCTTCT 12835
Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206
| | ||| | || | ||||| || ||||| ||||| || || || || || |||||||
Sbjct 12834 TTAACCAGTAGATGGCTGCAAAGGACCCAGAGAAGAAAATCCCCTCCACCGCAGCAAAGG 12775
Query 42207 CAATAAGTCTCTCTCC 42222
| | || |||||| ||
Sbjct 12774 CCACAATTCTCTCCCC 12759
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 666934949152480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |