Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq26569 86.0 3e-12 seq12148 86.0 3e-12 seq2735 86.0 3e-12 seq481616 84.2 1e-11 seq16533 84.2 1e-11 seq7771 84.2 1e-11 seq3320 84.2 1e-11 seq1808 84.2 1e-11 seq647 84.2 1e-11 seq358048 82.4 4e-11 seq5391 82.4 4e-11 seq514 82.4 4e-11 seq14 82.4 4e-11 >seq26569 Length=3551 Score = 86.0 bits (94), Expect = 3e-12 Identities = 70/85 (82%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 ||| ||||| ||| | |||||| | |||||||||| ||||||| ||||||||||| Sbjct 3488 AATCAAAAACCAACTGTTGGCCCGTACGGGGATCGAACCCACGACCTTGGCGTTATTAGC 3429 Query 11499 ACGACGCTCTRACCAACTGAGCTAA 11523 || ||||||| |||||||||||||| Sbjct 3428 ACCACGCTCTAACCAACTGAGCTAA 3404 >seq12148 Length=10046 Score = 86.0 bits (94), Expect = 3e-12 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||||| | | |||||| | |||||||||| ||||||| ||||||||||||| Sbjct 9356 AAAAAAAAAAGATAGTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCAC 9415 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||| |||||||||||||| |||| Sbjct 9416 CACGCTCTAACCAACTGAGCTAACCGGCC 9444 >seq2735 Length=74195 Score = 86.0 bits (94), Expect = 3e-12 Identities = 74/92 (80%), Gaps = 3/92 (3%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAA---TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497 || |||||| ||| ||||||| | |||||||||| ||||||| |||||||||| Sbjct 19858 AAAAAAAAAGAAAAGGTTTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAG 19917 Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||| ||||||| |||||||||||||| |||| Sbjct 19918 CACCACGCTCTAACCAACTGAGCTAACCGGCC 19949 >seq481616 Length=4056 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||| || || ||||||| ||||||| ||||||||||||| ||||||| ||||| Sbjct 512 TTGGCCCGTGCGGGGGTCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAA 453 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 452 CTGAGCTAACCGGCC 438 >seq16533 Length=13060 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 3691 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 3750 Query 11528 CCG 11530 ||| Sbjct 3751 CCG 3753 >seq7771 Length=21559 Score = 84.2 bits (92), Expect = 1e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| || |||||| | |||||||||| ||||||| ||||||||||||| ||| Sbjct 16491 AAAAACGGAAGTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACG 16550 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||| |||| Sbjct 16551 CTCTAACCAACTGAGCTAACCGGCC 16575 >seq3320 Length=42481 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||| | |||||||||| ||||||| ||||||||||||| ||||||| ||||| Sbjct 42271 TTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAA 42330 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 42331 CTGAGCTAACCGGCC 42345 >seq1808 Length=72375 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||| | |||||||||| ||||||| ||||||||||||| ||||||| ||||| Sbjct 63725 TTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAA 63784 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 63785 CTGAGCTAACCGGCC 63799 >seq647 Length=286143 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||| | |||||||||| ||||||| ||||||||||||| ||||||| ||||| Sbjct 6753 TTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAA 6812 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 6813 CTGAGCTAACCGGCC 6827 >seq358048 Length=923 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 911 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 852 Query 11528 CC 11529 || Sbjct 851 CC 850 >seq5391 Length=26286 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 18855 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 18914 Query 11528 CC 11529 || Sbjct 18915 CC 18916 >seq514 Length=215189 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 95658 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 95717 Query 11528 CC 11529 || Sbjct 95718 CC 95719 >seq14 Length=1305116 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 593068 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 593127 Query 11528 CC 11529 || Sbjct 593128 CC 593129 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 259894079411248