Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq854 145 1e-29 seq567 114 2e-20 >seq854 Length=129104 Score = 145 bits (160), Expect = 1e-29 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 8735 GCACTCTTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCC 8794 ||| | ||||||||| | || || || | ||||| |||||||| || ||||||| || Sbjct 58650 GCAGTGTTGACGATCTCGAATCCAACCTTCCCGCCAAAGGTGCTTGGCATCCAGTACTCC 58709 Query 8795 GGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGA 8854 ||||| |||||| ||| |||| || ||||| ||||| | || || |||| || | Sbjct 58710 GGGGAACAGATGGGGTTACCCATCAGCCCTTTCAGGGAGTAAGGGGCTCCCATTTCCACC 58769 Query 8855 ATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAAC 8914 ||| |||| || |||| || ||||| | |||||| |||||||||| |||| ||||| | Sbjct 58770 ATGGTCTCTCCAAAGACAGCATTGGGCCTGGGCTTCTCCACCAAGAGCCCGGGGTACAGC 58829 Query 8915 TCCACAGCCTCGATGTCTCCGTA 8937 ||||| || || ||||||||||| Sbjct 58830 TCCACTGCGTCAATGTCTCCGTA 58852 Score = 111 bits (122), Expect = 2e-19 Identities = 164/231 (71%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 9610 TCCCCGATAATGATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGT 9669 || || || | |||||| || ||||||||||| || | |||||| ||| || || || Sbjct 60137 TCACCAATGAGGATGAGGCGGGTGGTCTGAAAGAGGCGCTCGTCATCCCAGTCGGGGTGC 60196 Query 9670 TCTCGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATC 9729 || | |||| | ||||| || | |||||| || | |||||||| || ||||||||| Sbjct 60197 TCGCTCTTCAAGATGTCGCAGACGCGGTTGTGCTCGCGCAGCCAGATGGTGGCGTACATC 60256 Query 9730 ATGAGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGC 9789 ||||| || || |||||||| || ||||| || || || || || | || || Sbjct 60257 ATGAGGCCCGGGACCAGGCCGAAGGCCTCGTGCCCCACGGCAAGCTTGTGCTCCTCAGGG 60316 Query 9790 ACTTCGGGAGGATAGATCATGTGCACCTGGACATCTTTGACCG-AGGGGGG 9839 || | ||| || ||| ||| | |||||| || | || |||| ||||||| Sbjct 60317 ACATGGGGTGGGTAGTGCATCTCCACCTGCACTTGCTTCACCGTAGGGGGG 60367 Score = 86.0 bits (94), Expect = 9e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 10029 CTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAAA 10088 ||||| ||||| ||||| |||| ||||||||||| || | || || | | ||| Sbjct 61128 CTTACGCCATGACCCAGGGCTTTGGTGAAGGCCGGTCCCTTCTTCATGTCGGATTTGAAA 61187 Query 10089 AACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATCG 10148 ||||| || ||||| ||||| |||| ||||||||||| | ||| | || || ||||| Sbjct 61188 AACTGATGGGTGAAGTGTTGAGCAAAGAAGGCAAACATCATATTGCTTCCTTGAGGATCA 61247 Query 10149 GGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAA 10185 ||| ||||| | ||| | || ||| ||||||| Sbjct 61248 GGAATGAAGCGCTTCCTCAACAGCAGTTTCTCCACAA 61284 >seq567 Length=401712 Score = 114 bits (126), Expect = 2e-20 Identities = 165/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 9622 ATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGA 9681 ||||| || |||||||| || || | || || ||| || || || ||||||| Sbjct 243636 ATGAGGCGTGTGGTCTGGAAGAGGCGCTCATCGTCCCAGGTGGGGTGCTCCTGTTTCAGC 243695 Query 9682 ACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGC 9741 || || || || | |||||| || | |||||||| || || ||||||||||| || || Sbjct 243696 ACGTCACAGACCCGGTTGTGCTCACGAAGCCAGATGGTGGCATACATCATGAGTCCTGGG 243755 Query 9742 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACTTCGGGAGGA 9801 | ||| ||||| || || || || || || | || | ||||| || | ||||||| Sbjct 243756 ATCAGCCCAAATGCTTCATGGCCCACGGCAAAGCGGTGCTCCTCGGGGACATGGGGAGGA 243815 Query 9802 TAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCGTC 9854 ||| ||||| ||||||||| || || || | || ||||||| ||| || || Sbjct 243816 TAGTGCATGTCCACCTGGACCTCCTTCACTGTAGGAGGATACACTTCCCCATC 243868 Score = 87.8 bits (96), Expect = 3e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 10305 GGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCGTAATAGGAGAGATTGGAG 10364 || ||||| ||||| | ||| || || ||||| | | || |||||||||||| || || Sbjct 244968 GGTGTTGGGCAATCTTCAGGTACAGGCGGTAGGGTTCGTGTGTAATAGGAGAGGTTTGAA 245027 Query 10365 AAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTAGATGGGAGGGCTGTCAATCAAA 10424 | |||||||||||| ||| | || || | |||||| | ||||||||||| |||||| Sbjct 245028 TACGCTTCCCAGCTTTTGTAACCATAATCTGAATTGTAGGTAGGAGGGCTGTCGATCAAA 245087 Query 10425 T 10425 | Sbjct 245088 T 245088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 704086352669120