Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq19541 205 1e-48 seq5156 192 9e-45 seq7160 172 9e-39 seq272384 156 7e-34 seq288786 154 2e-33 seq4615 154 2e-33 seq832 154 2e-33 seq462348 147 3e-31 seq300004 129 9e-26 seq25 127 3e-25 seq408024 113 7e-21 seq295588 113 7e-21 >seq19541 Length=4620 Score = 205 bits (226), Expect = 1e-48 Identities = 191/243 (79%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||||||||| | |||||| |||||||||||||| || || |||||||| || Sbjct 918 CGCTAAGCGTCATCGCAAAGTTCTTCGTGATAACATCCAAGGTATTACAAAGCCAGCGAT 859 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||| ||||||| ||||| |||||||||||| | ||||| || |||||||||||| Sbjct 858 TCGTCGTTTGGCTCGCCGTGGAGGAGTCAAGCGTATATCTGGTCTGATCTATGAAGAGAC 799 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || |||| | || || ||| ||| |||| ||||||| || ||| ||||| Sbjct 798 CCGAGGAGTACTGAAAGTGTTTCTGGAGAACGTCATCCGTGATGCTGTCACCTACACCGA 739 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| ||| | ||||||||||| | |||||| | || ||||| |||| ||||| || Sbjct 738 ACACGCCAAAAGAAAGACTGTCACAGCTATGGATGTGGTGTATGCTCTGAAGCGTCAGGG 679 Query 16672 CCG 16674 || Sbjct 678 TCG 676 >seq5156 Length=35996 Score = 192 bits (212), Expect = 9e-45 Identities = 199/261 (76%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||||||||| | ||| || ||||||||||| |||||||||||||| || || Sbjct 32533 CGCCAAGCGTCATCGTAAGGTTCTGCGTGATAACATCCAGGGAATCACCAAGCCTGCCAT 32474 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || || ||||||||||| || || |||||| |||| || || |||| ||||||| Sbjct 32473 CCGCCGACTTGCTCGTCGTGGCGGTGTGAAGCGTATCTCCGGCCTGATCTACGAAGAGAC 32414 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | ||| | ||||| ||| ||| |||| |||||| | ||| || || Sbjct 32413 CCGTGGTGTGCTTAAGGTGTTCCTGGAGAACGTCATCCGTGATGCCGTTACCTACACTGA 32354 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | ||||| |||||| | |||||| |||||||||| |||| ||||| || Sbjct 32353 GCACGCCAAGAGAAAGACCGTCACCGCTATGGATGTCGTCTATGCTCTGAAGCGTCAGGG 32294 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 ||| | | ||||| || || Sbjct 32293 CCGAACCCTGTATGGCTTCGG 32273 >seq7160 Length=19695 Score = 172 bits (190), Expect = 9e-39 Identities = 184/243 (76%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||| ||||||| | ||| || || |||||||| || || || |||||||| || Sbjct 1948 CGCTAAGCGCCATCGCAAAGTTCTCCGTGACAACATCCAGGGTATTACAAAGCCAGCAAT 1889 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||| ||||||| || || |||||||||||| | ||||| | |||| || |||| Sbjct 1888 TCGTCGTTTGGCTCGCCGCGGAGGAGTCAAGCGTATATCTGGTCTCATCTACGAGGAGAC 1829 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | ||| ||||| | || || ||| |||||||| ||||| || ||| ||||| Sbjct 1828 TCGCGGTGTGCTGAAGGTGTTTCTGGAGAACGTTATCCGCGATGCCGTCACCTACACCGA 1769 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||||| | ||||| || ||| | |||||| | || ||||| |||| ||||| || Sbjct 1768 ACACGCTAAGAGAAAGACCGTGACCGCTATGGATGTGGTTTATGCCCTGAAGCGTCAGGG 1709 Query 16672 CCG 16674 || Sbjct 1708 TCG 1706 >seq272384 Length=285 Score = 156 bits (172), Expect = 7e-34 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| | ||| || |||||||||||||| || || |||||||| ||| Sbjct 207 GCCAAGCGTCATCGCAAAGTTCTCCGTGATAACATCCAAGGGATAACTAAGCCAGCGATC 148 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||| ||||||| ||||| |||||||||||| | ||||| | |||| || |||| | Sbjct 147 CGTCGTTTGGCTCGCCGTGGAGGAGTCAAGCGTATATCTGGCCTTATCTACGAGGAGACT 88 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || ||||| | || | ||| |||||||| ||||| || ||| |||||| Sbjct 87 CGCGGAGTGCTGAAGGTGTTTTTGGAGAACGTTATCCGCGATGCCGTCACCTACACCGAG 28 Query 16613 CACGCTAAACGTAAGACTGTCACC 16636 || || || | ||||| |||||| Sbjct 27 CATGCCAAGAGAAAGACCGTCACC 4 >seq288786 Length=326 Score = 154 bits (170), Expect = 2e-33 Identities = 174/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 16442 CATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTG 16501 ||||||| | ||| || || ||||||||||| || || |||||||| || |||||| || Sbjct 1 CATCGCAAAGTTCTCCGTGACAACATCCAAGGTATTACTAAGCCAGCGATTCGTCGTTTG 60 Query 16502 GCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTT 16561 ||||| |||||||||||||||||| |||| || | |||| ||||||| || | || Sbjct 61 GCTCGCCGTGGTGGAGTCAAGCGTATCTCAGGTCTCATCTACGAAGAGACCCGAGGAGTG 120 Query 16562 TTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAA 16621 | ||| | || || ||| ||| || | |||||| || ||| || |||||||| || Sbjct 121 CTTAAGGTGTTTCTGGAGAACGTCATTCGTGATGCCGTCACCTACACTGAGCACGCCAAG 180 Query 16622 CGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCG 16674 | ||||| |||||| | |||||| | || || || |||| ||||| || || Sbjct 181 AGGAAGACCGTCACCGCTATGGATGTGGTTTACGCTCTGAAGCGTCAGGGTCG 233 >seq4615 Length=30722 Score = 154 bits (170), Expect = 2e-33 Identities = 180/243 (74%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||||||||| | ||| || || ||||||||||| || || || || || || Sbjct 21179 CGCTAAGCGTCATCGCAAAGTTCTCCGTGACAACATCCAAGGTATTACTAAACCTGCGAT 21120 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||| | ||||| ||||| ||||||||||| |||| || | |||| ||||||| Sbjct 21119 TCGTCGTTTAGCTCGCCGTGGAGGAGTCAAGCGCATCTCAGGTCTCATCTACGAAGAGAC 21060 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | ||| | || | ||| |||||||| ||||| || ||| ||||| Sbjct 21059 CCGAGGAGTGCTTAAGGTGTTTTTGGAGAACGTTATCCGCGATGCAGTCACCTACACCGA 21000 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | ||||| |||||| | |||||| | || ||||| |||| || || || Sbjct 20999 GCACGCCAAGAGAAAGACCGTCACCGCTATGGATGTGGTTTATGCTCTGAAGCGGCAGGG 20940 Query 16672 CCG 16674 || Sbjct 20939 TCG 20937 >seq832 Length=131147 Score = 154 bits (170), Expect = 2e-33 Identities = 195/268 (73%), Gaps = 0/268 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| | ||||| || || ||||| || || || || ||||| ||| Sbjct 37446 GCAAAGCGTCATCGCAAAGTACTTCGCGACAATATCCAGGGCATTACAAAACCAGCGATC 37387 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 | || ||||||||||||||||| || |||||| | |||||| | | |||||||||| Sbjct 37386 AGACGGCTGGCTCGTCGTGGTGGTGTGAAGCGTATTTCTGGACTCATTTATGAAGAGACC 37327 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 | | ||| |||||| | || || ||| || |||| |||||| || ||||| || Sbjct 37326 AGAGGTGTGTTGAAGGTGTTTCTGGAGAATGTGATCCGCGATGCTGTCACTTATACTGAA 37267 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 || |||||| | ||||| || || | |||||| | || || || |||| || || ||| Sbjct 37266 CATGCTAAAAGAAAGACCGTTACTGCGATGGATGTGGTTTACGCTCTGAAGCGCCAGGGC 37207 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAAT 16700 || | | ||||| || ||| ||| || Sbjct 37206 CGCACTCTGTATGGCTTCGGAGGTTGAT 37179 >seq462348 Length=204 Score = 147 bits (162), Expect = 3e-31 Identities = 153/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 16436 AAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGT 16495 ||||||||||||| | ||| || || ||||||||||| || || || ||||| |||||| Sbjct 1 AAGCGTCATCGCAAAGTTCTCCGTGACAACATCCAAGGGATAACTAAACCAGCGATCCGT 60 Query 16496 CGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGT 16555 ||| ||||||| ||||| |||||||||||| | ||||| | |||| || |||| ||| Sbjct 61 CGTTTGGCTCGCCGTGGAGGAGTCAAGCGTATATCTGGCCTTATCTACGAGGAGACTCGC 120 Query 16556 GATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCAC 16615 | || ||||| | || | ||| |||||||| ||||| || ||| |||||||| Sbjct 121 GGAGTGCTGAAGGTGTTTTTGGAGAACGTTATCCGCGATGCCGTCACCTACACCGAGCAT 180 Query 16616 GCTAAACGTAAGACTGTCACC 16636 || || | ||||| |||||| Sbjct 181 GCCAAGAGAAAGACCGTCACC 201 >seq300004 Length=448 Score = 129 bits (142), Expect = 9e-26 Identities = 100/119 (84%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||||||||||| | |||||| ||||| |||||||| ||||| ||||||||||| Sbjct 317 CGCCAAGCGTCATCGCAAAGTTCTTCGTGATAATATCCAAGGTATCACTAAGCCAGCTAT 376 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||||| ||||||| ||||| |||||||||||| | ||||| | |||| ||||||| Sbjct 377 TCGTCGTTTGGCTCGCCGTGGAGGAGTCAAGCGTATTTCTGGTCTCATCTACGAAGAGA 435 >seq25 Length=706593 Score = 127 bits (140), Expect = 3e-25 Identities = 175/245 (71%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||||| |||||||| || || ||||| || |||||||| || || || |||||||||||| Sbjct 428625 CTTCGTGATAACATTCAGGGTATCACTAAACCAGCTATTCGCCGCCTCGCTCGTCGTGGT 428684 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || || || ||| | ||||| | |||| ||||| | | | || | || | ||| Sbjct 428685 GGTGTGAAACGTATATCTGGTCTTATCTACGAAGAAACCAGAGGAGTCCTCAAAGTGTTC 428744 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 | ||| ||| || | ||||| || || ||||||||||| ||||| || ||||| Sbjct 428745 TTGGAGAACGTCATTCGCGATGCAGTCACATACACCGAGCACGCGAAACGAAAAACTGTT 428804 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 || | ||||| | || ||||| | |||||||| || || | | |||||||| ||| Sbjct 428805 ACGGCGATGGACGTTGTGTATGCCCTAAAACGTCAGGGGCGCACATTGTATGGTTTCGGA 428864 Query 16694 AGTTA 16698 |||| Sbjct 428865 GGTTA 428869 >seq408024 Length=196 Score = 113 bits (124), Expect = 7e-21 Identities = 86/102 (84%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||||||||||| | ||| || || ||||||||||| || || |||||||| || Sbjct 91 CGCCAAGCGTCATCGCAAAGTTCTCCGTGACAACATCCAAGGTATTACTAAGCCAGCGAT 150 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGG 16533 |||||| ||||||| |||||||||||||||||| |||| || Sbjct 151 TCGTCGTTTGGCTCGCCGTGGTGGAGTCAAGCGTATCTCAGG 192 >seq295588 Length=217 Score = 113 bits (124), Expect = 7e-21 Identities = 86/102 (84%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||||||||||| | ||| || || ||||||||||| || || |||||||| || Sbjct 112 CGCCAAGCGTCATCGCAAAGTTCTCCGTGACAACATCCAAGGTATTACTAAGCCAGCGAT 171 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGG 16533 |||||| ||||||| |||||||||||||||||| |||| || Sbjct 172 TCGTCGTTTGGCTCGCCGTGGTGGAGTCAAGCGTATCTCAGG 213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78616996875564