Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq422119 105 2e-17 seq1095 86.0 2e-11 >seq422119 Length=456 Score = 105 bits (116), Expect = 2e-17 Identities = 115/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || ||| || | |||| || |||| || ||||||| ||||| || || ||||| ||| Sbjct 279 GCCCAGCAGGTGTGGTACGCGGTCATCGAGTCGCAGACGGAGACGGGCACGCCCTACATG 220 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 ||||||| || | |||||||||||| |||||||||| |||| || || || || Sbjct 219 CTGTACAAGGACGCCTGCAACCGCAAGAGCAACCAGCAGAACCTGGGCACCATCAAGTGC 160 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263 |||||||| || |||||||| | || |||||| Sbjct 159 AGCAACCTGTGCACCGAGATCGTGGAGTACACC 127 >seq1095 Length=300654 Score = 86.0 bits (94), Expect = 2e-11 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 111390 ACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACGT 111449 |||||| | || || || | | ||| ||| ||||||||||||| ||||||||| ||| Sbjct 2138 ACAAATTCCAAAGAGCTGTCGGAGAAAGGTGTGAAAATTTGGGATGCAAATGGATCCCGT 2197 Query 111450 GACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAGAAGGTGATCTCGGACCAGTTTAC 111509 || ||| | || ||| || ||| || ||||| || | || || |||||| Sbjct 2198 GATTTTTTGGACAAGAGTGGATTTACTAACAGGGAGGAAGGGGACTTGGGCCCTGTTTAC 2257 Query 111510 GGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCAC 111554 || || || ||| | ||||||||||| || |||||| ||||||| Sbjct 2258 GGTTTCCAGTGGAGACACTTTGGTGCTGAATACAAAGACATGCAC 2302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1294984820297736