Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq440983 131 1e-25 seq2169 105 4e-18 seq10709 89.7 3e-13 seq395 82.4 5e-11 >seq440983 Length=7751 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct 6530 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGGTAGGGACAGTGGGAATCTCGT 6471 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 6470 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 6436 Score = 98.7 bits (108), Expect = 7e-16 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 3957 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTCGACTATCGGTCTCGT 3898 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 3897 GCCGGTATTTAGCCTTA 3881 >seq2169 Length=122891 Score = 105 bits (116), Expect = 4e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 6333 TTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGTT 6392 || || || || || || || ||||| ||||||||| ||| || || |||| ||| || Sbjct 18679 TTTGGATGTGAGCTGGGTGCCCAGACTCAGTTTGATTCCAAGAATGACCGCTACATTGTC 18738 Query 6393 AACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGTTT 6452 ||||| || || | | ||||||||||||| | || ||||| || || | || ||| Sbjct 18739 AACGGGTCACACGAGGCAAACAAGCTGCAGGACATGCTGGACGGATTCATCAGGAAATTT 18798 Query 6453 GTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCT 6490 |||||||||| ||||||||||| || || ||||| || Sbjct 18799 GTGCTGTGTCCCGAATGCGATAATCCAGAAACCGACCT 18836 >seq10709 Length=15695 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| | ||||||||| |||| |||||| Sbjct 1272 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTATGGTACTTGTCGACTATTGGTCTCCT 1213 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 1212 GCCAGTATTTAGCCTTA 1196 >seq395 Length=367820 Score = 82.4 bits (90), Expect = 5e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380 || || || | ||| || || || || || || ||||| ||||||||| ||| || || Sbjct 188790 CCCACCAAGTTTTTTGGCTGTGAGCTGGGTGCCCAGACCCAGTTTGATGCCAAGAATGAC 188731 Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTT 6440 |||| ||| || || ||||| || | | ||| ||||||||| | || || || || Sbjct 188730 CGCTACATTGTCAATGGATCTCACGAGGCGAACAAACTGCAGGACATGCTGGATGGTTTC 188671 Query 6441 ATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCT 6490 || | || ||||||||||||| || || || || || || || || || Sbjct 188670 ATCAGAAAATTTGTGCTGTGTCCTGAGTGTGACAATCCAGAAACTGACCT 188621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 332901429169988