Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq487837 93.3 4e-14 >seq487837 Length=248 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || ||||||| | || |||||| | Sbjct 35 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 94 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || ||| | || || ||| ||||| ||||| ||||| || ||||| Sbjct 95 GACACCATTGAGAAA----AGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 150 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || ||||||||||| || | ||||||| ||||| || ||| ||||| Sbjct 151 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 210 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||||| || || || ||||| Sbjct 211 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCT 242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430681344699620