Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1686 109 5e-19 seq487837 96.9 3e-15 >seq1686 Length=76845 Score = 109 bits (120), Expect = 5e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 22212 TGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGA 22271 ||| | |||||| || ||||| ||||| | || || || || |||| || || ||||| Sbjct 57613 TGTGACGATGCAGATCTTTGTGAAAACCCTGACTGGCAAGACCATCACCCTGGAGGTGGA 57554 Query 22272 AACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACC 22331 ||| || ||| | || || |||| || || || |||||||| || ||||| || Sbjct 57553 GCCCAGTGACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCC 57494 Query 22332 CGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGA 22391 || || || | || || || || ||||||||| | || ||| ||| || | ||||| Sbjct 57493 TGACCAGCAGAGGCTGATCTTCGCTGGCAAACAGCTGGAAGATGGCCGTACTCTGTCCGA 57434 Query 22392 TTACAACATTCAAAAAGAATCCACC 22416 ||||||||||| |||||||| ||| Sbjct 57433 CTACAACATTCAGAAAGAATCAACC 57409 >seq487837 Length=248 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || || ||||| ||| | Sbjct 35 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 94 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | || || || || |||||||| || ||||| || || || Sbjct 95 GACACCATTGAGAA----AAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 150 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||||||||| ||| | || ||| ||||||| | ||||| |||||| Sbjct 151 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 210 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGA 22434 || || || || |||||| | || || || ||||| Sbjct 211 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGA 246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417164409980620