Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20]
501,148 sequences; 1,018,701,900 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq487837 179 7e-40
seq1686 158 2e-33
seq19981 96.9 6e-15
seq90 87.8 3e-12
seq2505 84.2 4e-11
>seq487837
Length=248
Score = 179 bits (198), Expect = 7e-40
Identities = 173/219 (79%), Gaps = 6/219 (3%)
Strand=Plus/Minus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| |||||||| || |||||||| || |||||||| || ||||| || || |
Sbjct 248 AGTCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGG 189
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| ||||| || || || || || ||||| || ||||||||||||
Sbjct 188 CCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCC 129
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGT 68422
||||| || ||||| ||||| ||| |||||||| ||| | || || |||| |||
Sbjct 128 TTGTCCTGGATCTTGGCCTT----TTCTCAATGGTGTC-GCTGGGCTCCACCTCCAGGGT 74
Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||||| || || ||||||||||||||||| ||||||||
Sbjct 73 GATGGTCTTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 35
>seq1686
Length=76845
Score = 158 bits (174), Expect = 2e-33
Identities = 170/225 (76%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 68237 TCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAG 68296
||| | ||| |||| |||| ||| || || || ||||| || ||||| || ||||| ||
Sbjct 57382 TCCTCTAAGACGCAGGACCAGGTGAAGGGTTGATTCTTTCTGAATGTTGTAGTCGGACAG 57441
Query 68297 TGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAAT 68356
|| | |||||||| | ||| || || ||||| || || || || ||||| || |||||
Sbjct 57442 AGTACGGCCATCTTCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGAAT 57501
Query 68357 GCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTC 68416
|||||||||||| || ||||| |||||||| ||| |||||||| | || || ||
Sbjct 57502 GCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTC 57561
Query 68417 CAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| ||||||||| || || || ||||| || || || ||||||||
Sbjct 57562 CAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 57606
>seq19981
Length=13813
Score = 96.9 bits (106), Expect = 6e-15
Identities = 107/142 (75%), Gaps = 3/142 (2%)
Strand=Plus/Minus
Query 9892 TTTAGAAGTCTGCGTCAATTGCAAACACGTTGTCGTCGGCATT---CATGACGCCCGCCT 9948
|||||||||| || || | | || |||||| | || || |||||| ||| ||
Sbjct 9828 TTTAGAAGTCAGCTTCCAGAGTGAAGGTGTTGTCCACAGCCTTGGACATGACCCCCATCT 9769
Query 9949 TCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGGGAAATGAGCT 10008
||||||||||| || || ||| |||||||||| ||| ||||| ||||| ||| ||
Sbjct 9768 TCTGGTACTCCCCCACACGCTTCTCAAAGAAGTTGGTCTTCCCCTCCAGGGAGATGTTCT 9709
Query 10009 CCATGAAGTCAAAGGGGTTCTC 10030
|||||||||| |||||||||||
Sbjct 9708 CCATGAAGTCGAAGGGGTTCTC 9687
>seq90
Length=1540152
Score = 87.8 bits (96), Expect = 3e-12
Identities = 84/105 (80%), Gaps = 2/105 (2%)
Strand=Plus/Plus
Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTC 68416
|||||||| ||||| ||||||||||| || |||||||||||| ||| | ||| || ||
Sbjct 1345696 CCTTCCTTATCTTGGATCTTTGCCTTCACATTCTCGATGGTGTC-GCTGGGTTCCACCTC 1345754
Query 68417 CAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| |||||||||||| || || | || || || |||||||||||
Sbjct 1345755 GAGGGTGATGGTTTTCCCTGTCAACGTTTTCACAAATATCTGCAT 1345799
>seq2505
Length=101583
Score = 84.2 bits (92), Expect = 4e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417
|||||||| || || ||||| ||||| || |||||||||||| | ||| || ||
Sbjct 72642 CCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGTTCCACCTCG 72701
Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| ||||||||||||||| || | ||| || ||||| ||||||||
Sbjct 72702 AGGGTGATGGTTTTTCCTGTCAAGGTTTTCACGAAGATCTGCAT 72745
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915849034718560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |