Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1686 140 3e-28 seq487837 87.8 1e-12 >seq1686 Length=76845 Score = 140 bits (154), Expect = 3e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || |||||||| ||||||||||| ||| || |||||| |||||| || ||||| ||| Sbjct 57410 GTTGATTCTTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCTTCCAGCTGTTTGCCA 57469 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| || | ||| ||||| |||||||||||||| ||||| ||||| || Sbjct 57470 GCGAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTG 57529 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| ||| || || |||| ||| | || ||||| ||||| ||| Sbjct 57530 ACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTT 57589 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 57590 TTCACAAAGATCTGCAT 57606 >seq487837 Length=248 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/219 (69%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 |||| || || || || | || || || || || |||||||| ||| || || || Sbjct 248 AGTCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGG 189 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 |||||| || || || || || |||| || | ||| ||||| || ||||||||||| Sbjct 188 CCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCC 129 Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344 ||||| ||||| || | |||| ||||||| ||| || || |||| ||| Sbjct 128 TTGTCCTGGATCTTGGCCTT----TTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTG 73 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 | || ||||| || || || || || || ||||||||| Sbjct 72 ATGGTCTTGCCTGTGAGGGTCTTGACGAAGATCTGCATG 34 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417568327794576