Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq232609 147 4e-30 seq279539 141 2e-28 seq422119 134 3e-26 seq19981 120 6e-22 seq208733 118 2e-21 seq1736 105 1e-17 seq1395 96.9 7e-15 >seq232609 Length=862 Score = 147 bits (162), Expect = 4e-30 Identities = 167/219 (76%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 244317 GCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGG-GCC 244375 ||| ||||||||||||||| |||| | |||||| |||||| |||| || | | ||| Sbjct 384 GCACCCCCTTGCTGACGGGCGAGCCCGCATAGGTCTCGTAGGGCCCGT-GCTCGGCCGCC 326 Query 244376 AGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATG 244435 || | ||||| | || |||||||||||||||||||||||||||||| |||| | | Sbjct 325 AGGTCGCAGCTGGCCTCCAGGGCGGCGTAGTAGATGGTCTCGAAGATCTGGCTGTTGA-G 267 Query 244436 TCGC-GGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCC 244494 || |||||| || |||||||| || ||||| |||||| |||||||||| || Sbjct 266 CAGCTGGGCCTCCGGGCTCTCGAAGGGGAAGCGCATCAGGATGAAGGCGTCGGCCAGGCC 207 Query 244495 CTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGA 244533 |||||| || || ||||| || ||||| | ||| ||||| Sbjct 206 CTGCACCCCAATCCCGATCGGCCTGTGCCTCTTATTGGA 168 >seq279539 Length=228 Score = 141 bits (156), Expect = 2e-28 Identities = 122/151 (81%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 245003 ACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGC 245062 ||||||| ||||||||||||||||||||||||||| | ||||||||| | | || |||| Sbjct 64 ACCCTCTTCATGAAGAGGTCGGGGATCCAGAGGGCGTAGAAGAGGTCGCGAGCCCGCTGC 123 Query 245063 TCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGC 245122 || ||| || ||||||||| ||||||||| || || |||| ||| | |||||||||| Sbjct 124 TCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAACTCGAAGATGTCAAAGTGCCAGGGC 183 Query 245123 TCCATGTAGACAGCGAGGGCGCCGGGCCGCT 245153 |||| ||| | |||| || ||||||| || Sbjct 184 TCCAGGTACATGGCGAACGCCCCGGGCCTCT 214 >seq422119 Length=456 Score = 134 bits (148), Expect = 3e-26 Identities = 107/129 (83%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 244705 CACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGT 244764 |||||| ||| | ||||||||| || ||||||||||| ||||| |||||||||||||| Sbjct 112 CACCTCGTCCTTGCTGGTGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGATGGT 171 Query 244765 GCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCC 244824 |||||||| ||| || ||| |||| |||||||||||||||||| |||||| ||||| Sbjct 172 GCCCAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGCGTCCTTGTACAGCATGTAGGGCGT 231 Query 244825 CCCGGTCTC 244833 || ||||| Sbjct 232 GCCCGTCTC 240 >seq19981 Length=13813 Score = 120 bits (132), Expect = 6e-22 Identities = 162/223 (73%), Gaps = 7/223 (3%) Strand=Plus/Plus Query 42829 AGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCT 42888 |||| ||||| | ||||||||||||||| ||||| |||||||| |||| || | Sbjct 4273 AGGGCCTGCACTGTGACTTTGCCTGCCTCATGTTC---AGCCACCTGCGGCAGCGCCCGT 4329 Query 42889 CGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCA 42948 || || |||||| || | |||| ||| ||||||| |||||| |||||||||| | Sbjct 4330 CGGAGACGCGGGTGAAGGAGGTGATCAGGGACGCCGTGGCCATCGAGCAGGAGTTCCTGA 4389 Query 42949 CGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAAC--CACGACCTCATGTGCAAGTACAT 43006 | | |||||||||| |||| |||| |||||| |||| |||||| | ||||| Sbjct 4390 CCGGGGCGCTGCCCGTCAGCCTGATCGGGATGAACTGCACG--CTCATGAAGAGCTACAT 4447 Query 43007 CCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGC 43049 ||||| || ||||||| || ||| | || |||| ||||| Sbjct 4448 CCAGTTTGTGGCCGACCGCCTGCTGCTCGAGCTGGGCTTCAGC 4490 Score = 87.8 bits (96), Expect = 3e-12 Identities = 103/137 (75%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 |||||| | |||| || || | || || || || ||||| ||||| || | || ||| Sbjct 3623 GGCGAGCGTGTGGTGGCGTTCGCGGCTGTGGAAGGGATCTTTTTCTCCGGTTCGTTTGCC 3682 Query 42756 TCCATCTTCTGGCTCAAG-CAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814 ||||||||||||| ||| | ||| || ||||| || || |||||||| ||||| || Sbjct 3683 GCCATCTTCTGGCTGAAGAAACGAGGCCTC-ATGCCGGGCCTGACCTTCTCCAACGAGCT 3741 Query 42815 CATCAGCAGGGACGAGG 42831 ||||||| | ||||||| Sbjct 3742 CATCAGCCGAGACGAGG 3758 Score = 87.8 bits (96), Expect = 3e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCG 43129 |||||||||||| |||||||||||||| ||||||| ||||||||||| || |||||||| Sbjct 9692 CCCCTTCGACTTCATGGAGAACATCTCCCTGGAGGGGAAGACCAACTTCTTTGAGAAGCG 9751 Query 43130 CGTCGCCGACTACCAG 43145 || | || |||||| Sbjct 9752 TGTGGGGGAGTACCAG 9767 >seq208733 Length=363 Score = 118 bits (130), Expect = 2e-21 Identities = 115/147 (78%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 244095 CCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGA 244154 ||||||| |||||||| || ||||||||||| ||| ||||| ||| || ||||| | Sbjct 30 CCACCTGGAACTCTCCGGAGAGCACGCGGCGGGTGTACAGGTTACTGGTGTAGGGCTCCA 89 Query 244155 TGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCA 244214 || ||| |||||||||| ||||| || ||| || || |||||||| | || ||||| Sbjct 90 TGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATGGGGGCCAGCAGCA 149 Query 244215 GACTGTTCCTCACGCCGTGCCTCTGGA 244241 | ||||||||||| ||||| |||||| Sbjct 150 GGCTGTTCCTCACCCCGTG--TCTGGA 174 >seq1736 Length=128588 Score = 105 bits (116), Expect = 1e-17 Identities = 101/127 (80%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765 ||||||||||| | || || || || ||||||||||| || | || || |||||||||| Sbjct 22390 TGGTAGCCTTTGCTGCAGTTGAAGGAATCTTCTTCTCTGGGTCGTTTGCTTCCATCTTCT 22331 Query 42766 GGCTCAAGCAGAAGGTGTC-GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824 || | ||| || ||| ||| |||||| || ||||| ||||| ||||| || |||||||| Sbjct 22330 GGTTGAAGAAG-AGGGGTCTGATGCCTGGTCTCACGTTCTCCAACGAGCTGATCAGCAGA 22272 Query 42825 GACGAGG 42831 || |||| Sbjct 22271 GATGAGG 22265 >seq1395 Length=115546 Score = 96.9 bits (106), Expect = 7e-15 Identities = 105/137 (77%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 || ||||| | || |||||| | || || ||||| || |||||||| || |||| || Sbjct 12759 GGGGAGAGAATTGTGGCCTTTGCTGCGGTGGAGGGGATTTTCTTCTCTGGGTCCTTTGCA 12818 Query 42756 TCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814 |||||| |||| | ||| ||| ||| || |||||||||||||||| ||| || || || Sbjct 12819 GCCATCTACTGGTTAAAGAAGAGAGGCCTC-ATGCCCGGACTCACCTACTCCAATGAGCT 12877 Query 42815 CATCAGCAGGGACGAGG 42831 |||||||| || |||| Sbjct 12878 TATCAGCAGAGATGAGG 12894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 938423528732480