Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1686 104 5e-17 seq487837 102 2e-16 >seq1686 Length=76845 Score = 104 bits (114), Expect = 5e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| || || || ||||||| || || || || ||||| | ||||| || ||||| Sbjct 57415 TTCTTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCTTCCAGCTGTTTGCCAGCGAA 57474 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||||| | ||| || | || || ||||| || |||||||| || || || || || Sbjct 57475 GATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 57534 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || || | || || || || ||||| ||||| || ||||| || || || Sbjct 57535 CTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTTTTCAC 57594 Query 288462 GAATATCTGCAT 288473 || |||||||| Sbjct 57595 AAAGATCTGCAT 57606 >seq487837 Length=248 Score = 102 bits (112), Expect = 2e-16 Identities = 140/194 (72%), Gaps = 10/194 (5%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||| || ||||| | || || || || ||| Sbjct 221 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 162 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| || |||||| || ||||| || |||||||| || || || Sbjct 161 ATCAGCCTCTGCTGG---TCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTT---- 109 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||||| | || || || || ||||| ||||| || || || |||||| Sbjct 108 TTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTG 49 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 48 ACGAAGATCTGCAT 35 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1172079887758344