Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq567 122 1e-22 seq854 96.9 5e-15 >seq567 Length=401712 Score = 122 bits (134), Expect = 1e-22 Identities = 185/257 (72%), Gaps = 6/257 (2%) Strand=Plus/Plus Query 9436 CCGGCAATCTGTCTAGTGAACGATTCAACTA-ATTGGGCTATTCCGTGCTTGATGAGGAT 9494 || |||||||| | ||||| || ||| | | |||| | || || || | |||| | Sbjct 243117 CCTGCAATCTGCTTGGTGAAGGACTCAGCCAGATTGTGG-ATGCCATGGTCCATGACTAC 243175 Query 9495 GGAATTGTTGTAAACGAAGTGTTCGTAACCATACTTCGCGTCGCCTATGCGAAAATCATC 9554 |||||||||| | | || || | ||||| || | ||| ||| | || | || Sbjct 243176 GGAATTGTTGAAGAGAAACTGCTTGTAACTGTAGACCTGGTCCTGGATGTGGAAGGCGTC 243235 Query 9555 AGGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGGTA 9614 ||||| ||| | |||||| |||||||||| |||||||||| || || ||||||||||| Sbjct 243236 AGGCATCAGCGGGTGCCAGTGGTAGAGGGTGTTGAACTCGGACGAGATGCGGTTCTGGTA 243295 Query 9615 CTGAAAG-GC-GGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCCG 9672 ||| ||| || ||| |||||| | ||| ||||| || | |||| |||||||||||| Sbjct 243296 CTGGAAGCGCTGGT--TGAACAGCAGCTCGGGGTCGAACTTCAGCTTGAAGTGGTACCCA 243353 Query 9673 CTGAGTTGCTGGACATA 9689 || || ||||| || || Sbjct 243354 CTCAGATGCTGCACGTA 243370 >seq854 Length=129104 Score = 96.9 bits (106), Expect = 5e-15 Identities = 176/255 (69%), Gaps = 2/255 (1%) Strand=Plus/Plus Query 9436 CCGGCAATCTGTCTAGTGAACGATTCAACTAATTGGGCTATTCCGTGCTTGATGAGGATG 9495 ||||| ||||| | || || || || || | | | | || ||||||| |||| | Sbjct 59631 CCGGCGATCTGCTTGGTAAAAGACTCCACCAGGTTGCCAATGCCGTGCTCCATGACCAGC 59690 Query 9496 GAATTGTTGTAAACGAAGTGTTCGTAACCATACTTCGCGTCGCCTATGCGAAAATCATCA 9555 || |||||| | | ||| || ||| ||||||| | | | ||| | || || Sbjct 59691 GAGTTGTTGAACATGAACTGCGGGTAGCCATACTCCTGGCCCTGGATGTGGAACGAGTCG 59750 Query 9556 GGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGGTAC 9615 |||| | | |||||| ||||||||| ||||||||||| || || |||||||||||| Sbjct 59751 GGCATTAACGGGTGCCAGTGGTAGAGGGCATTGAACTCGGAGGCAATGCGGTTCTGGTAC 59810 Query 9616 T-GAAAGGCGGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCCGCT 9674 | |||| || | |||||| | ||||||||| || | |||| ||| || || || || Sbjct 59811 TGGAAACGC-TCATTGAACAGCAGCTCCGGGTCGAACTTCAGCTTGAAATGATAGCCACT 59869 Query 9675 GAGTTGCTGGACATA 9689 || ||||| || || Sbjct 59870 CAGGTGCTGCACGTA 59884 Score = 95.1 bits (104), Expect = 2e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 9726 GATTAGACGAGTGGTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAG 9785 ||| || || ||||| ||||| | |||||||| |||| || ||||| ||| || | Sbjct 60148 GATGAGGCGGGTGGTCTGAAAGAGGCGCTCGTCATCCCAGTCGGGGTGCTCGCTCTTCAA 60207 Query 9786 AACATCGCAGACCCTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGG 9845 | |||||||| | |||||| || | |||||| ||||||||||||||||| | ||||| Sbjct 60208 GATGTCGCAGACGCGGTTGTGCTCGCGCAGCCAGATGGTGGCGTACATCATGAGGCCCGG 60267 Query 9846 CACTAAACCAAACACTTCATTCCCCACTGCAA 9877 || | || || | || | |||||| |||| Sbjct 60268 GACCAGGCCGAAGGCCTCGTGCCCCACGGCAA 60299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 719194314503200