Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20]
501,148 sequences; 1,018,701,900 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq1686 129 1e-24
seq487837 116 9e-21
>seq1686
Length=76845
Score = 129 bits (142), Expect = 1e-24
Identities = 160/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467
|| ||| | |||||| ||||| || || || || || || | ||||||||| | || |||
Sbjct 57385 TCTAAGACGCAGGACCAGGTGAAGGGTTGATTCTTTCTGAATGTTGTAGTCGGACAGAGT 57444
Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527
| |||||||||||||| || || |||||||| || | ||||||||| ||| ||| ||
Sbjct 57445 ACGGCCATCTTCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGAATGCC 57504
Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587
||| ||||| ||||| ||| || || | |||||| | | || || ||||
Sbjct 57505 TTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAG 57564
Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || || ||||||||||| || ||
Sbjct 57565 GGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTG 57603
>seq487837
Length=248
Score = 116 bits (128), Expect = 9e-21
Identities = 155/215 (72%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471
|||| ||| || | ||| || || |||||||| |||| ||||||||| | || || |
Sbjct 248 AGTCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGG 189
Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531
||||||||||||||||| ||||| ||||| || | ||||||||| || ||| |||||
Sbjct 188 CCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCC 129
Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591
||||| ||||| ||| | || | |||||| | | || || |||| |||
Sbjct 128 TTGTCCTGGATCTTGGCCTTTTC----TCAATGGTGTCGCTGGGCTCCACCTCCAGGGTG 73
Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| ||||| || ||||| || || || || || ||
Sbjct 72 ATGGTCTTGCCTGTGAGGGTCTTGACGAAGATCTG 38
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1171351793036916
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |