Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20]
501,148 sequences; 1,018,701,900 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq487837 140 3e-28
seq1686 120 3e-22
seq19981 111 2e-19
seq1395 86.0 6e-12
>seq487837
Length=248
Score = 140 bits (154), Expect = 3e-28
Identities = 160/215 (74%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| ||||||||| | || || ||| ||| |
Sbjct 35 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 94
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | || | || |||| ||||| || || |||||| | |||||
Sbjct 95 GACACCATTGAGAA----AAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 150
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| |||| || | || ||||| |||||||| || | |||||||| ||||||||||
Sbjct 151 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 210
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||| ||||| | || ||||| |||||||||||
Sbjct 211 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCG 245
>seq1686
Length=76845
Score = 120 bits (132), Expect = 3e-22
Identities = 161/224 (72%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || ||||| || || ||||| ||||||||| | || || ||| |||
Sbjct 57606 ATGCAGATCTTTGTGAAAACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 57547
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| ||||| || || ||||| | |||||
Sbjct 57546 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAG 57487
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| |||| || | ||| |||||||||||||| || | || || || ||||||||||
Sbjct 57486 CAGAGGCTGATCTTCGCTGGCAAACAGCTGGAAGATGGCCGTACTCTGTCCGACTACAAC 57427
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGG 38467
|| || || ||| | || || || |||| |||||| | |||||
Sbjct 57426 ATTCAGAAAGAATCAACCCTTCACCTGGTCCTGCGTCTTAGAGG 57383
>seq19981
Length=13813
Score = 111 bits (122), Expect = 2e-19
Identities = 97/121 (80%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 133279 ACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATG 133338
||||| || |||||||| |||||||||||||||||||| |||||||||||||| ||||
Sbjct 2536 ACCAGGTTCTCGTTGACAATGCCGTCGCTGGCGGCGAAGAAGGCCAGCACGTGGGAGATG 2477
Query 133339 AAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACC 133398
|| |||||| | | |||| | |||||| | || |||||||||||||||| |||
Sbjct 2476 AAGAAGCGCTCCTCCTGCTTCAGACCCTCCCAATGCTGCATGTCCTTGGACAGGTCAACC 2417
Query 133399 T 133399
|
Sbjct 2416 T 2416
Score = 102 bits (112), Expect = 8e-17
Identities = 104/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976
||||||| | | ||||| |||||| ||| |||| ||| ||||||||||| ||||| |
Sbjct 3758 CCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTCAGGCCCGGCATGAGGCCTCGTTTCT 3699
Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036
| ||||| || |||||||| || || || || |||| || || || |||||||| |
Sbjct 3698 TCAGCCAGAAGATGGCGGCAAACGAACCGGAGAAAAAGATCCCTTCCACAGCCGCGAACG 3639
Query 133037 CCACCAGGCGCTCGCC 133052
|||||| ||||||||
Sbjct 3638 CCACCACACGCTCGCC 3623
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATT 132770
||| |||| ||||| | ||||||||| |||| |||||| | |||| ||| ||
Sbjct 4481 CAGCTCGAGCAGCAGGCGGTCGGCCACAAACTGGATGTAGCTCTTCATGAGCGTGCAGTT 4422
Query 132771 AAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGC 132830
| || | ||| | || |||||||| |||| || || ||||||||||| || ||
Sbjct 4421 CATCCCGATCAGGCTGACGGGCAGCGCCCCGGTCAGGAACTCCTGCTCGATGGCCACGGC 4362
Query 132831 GTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACAT 132890
||| ||| | ||| | || |||| | | ||| || ||| || || |||||||
Sbjct 4361 GTCCCTGATCACCTCCTTCACCCGCGTCTCCGACGGGCGCTGCCGCAGGTGGCTGAACAT 4302
Query 132891 CAAGCAAGCAAAGTCGCAATGCAAGCCCT 132919
| ||| |||||||| || |||| |||||
Sbjct 4301 GAGGCAGGCAAAGTCACAGTGCAGGCCCT 4273
>seq1395
Length=115546
Score = 86.0 bits (94), Expect = 6e-12
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
||| |||| |||||| | ||||| || ||||| |||||||||||| ||| || ||
Sbjct 11375 GTAAGTGTTGATGAGCATGCCGTACATCTCAGAGTGGACGTTCTCCATGAGGATCTGGAA 11316
Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACC 133281
||||||||| |||| ||||| ||||||||||||||| ||| | || ||||
Sbjct 11315 CCCGTAAAAGGACCGTGCCTCTGGGACCTGCACTTCTTGACTGAACCTCTGGACC 11261
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 497039542520320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |