Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq79 96.9 3e-14 seq744 95.1 9e-14 >seq79 Length=945648 Score = 96.9 bits (106), Expect = 3e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 ||||| |||| ||||||||||||||||||||| || |||| || |||||| ||||| | | Sbjct 899647 CCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATGATTCGCAGAACATTTAGACCTGAA 899588 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296 ||| | || || || || || ||||| | || ||||| || || || || || || || Sbjct 899587 ATTGTACCGGCGTCCTTGGTAGCTTGCCGCTGGGAATCATTGAAGTAAGCTGGTACCGTC 899528 Query 518297 ATAACGGC 518304 | ||| || Sbjct 899527 ACAACAGC 899520 Score = 87.8 bits (96), Expect = 1e-11 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 |||| | || ||||| || || |||||| | |||| || || || ||||||||||| Sbjct 898872 CAAACACTGTGTTGGTGGGGTTCATTGCAACCTGATTCTTTGCAGCGTCTCCAATCAGCC 898813 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 | || || || || || | ||||| || || || | || || ||||| || |||| Sbjct 898812 GCTCAGTATCGGTGAAAGCTACATAGCTGGGTGTGGTCCTGTTTCCCTGATCGTTGGCAA 898753 Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702 | || |||||||| |||| || | |||||||| || | ||||| || | ||||| Sbjct 898752 TGATCTCAACTTTGCCATGCTGGAAGACACCTACGCAGGAGTAGGTTGTCCCCAGATCAA 898693 Query 518703 TACCAA 518708 |||||| Sbjct 898692 TACCAA 898687 >seq744 Length=172919 Score = 95.1 bits (104), Expect = 9e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 ||||| || | ||||| |||| ||||||||||| || || || |||||||| | ||| Sbjct 123796 TTTTTGTCCAAGCCATAGGCAATGGCAGCAGCAGTGGGCTCGTTTATAATTCTTAGTACA 123855 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 || || |||| ||| | || ||||| || || ||||| | || |||||||| || || Sbjct 123856 TTTAGCCCAGAAATGGTCCCGGCATCCTTTGTAGCTTGCCGCTGAGAATCGTTGAAGTAA 123915 Query 518285 GCAGGAACAGTAATAACGGCAT 518306 || || ||||| | ||| |||| Sbjct 123916 GCTGGTACAGTTACAACAGCAT 123937 Score = 86.0 bits (94), Expect = 5e-11 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 ||||| || | ||||| |||| |||||||| ||||| || || || || | || ||| Sbjct 129852 TTTTTGTCCAAGCCATATGCAATTGCAGCAGCTGTTGGCTCGTTGATGATACGCAGCACA 129793 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 |||||||||| || |||| |||||||| || || || | || || || || || || Sbjct 129792 TTAAGACCAGAGATAGTTCCAGCATCTTTGGTAGCCTGACGCTGGGAGTCATTGAAGTAG 129733 Query 518285 GCAGGAACAGTAATAACGGCATCAGTTACT 518314 ||||| || || || || |||| || ||| Sbjct 129732 GCAGGCACCGTGATCACAGCATTGGTAACT 129703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3755953785458488