Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq277378 259 6e-64 seq79 185 1e-41 seq4411 107 2e-18 seq744 82.4 1e-10 >seq277378 Length=4497 Score = 259 bits (286), Expect = 6e-64 Identities = 788/1204 (65%), Gaps = 24/1204 (2%) Strand=Plus/Plus Query 6953 CCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCA 7012 || || ||||| || | ||| |||| | | ||||||||||||| || | ||| Sbjct 1790 CCCAGGGACAGCGGAGCCACATCCAGCAACAGCAGGTCTTGAACATTCTCAGAACTGTCA 1849 Query 7013 CCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATC 7072 ||| | | |||||| || ||||| | ||||||||| || || || || || ||||| || Sbjct 1850 CCCATGAGGATGGCAGCCTGGACAGCCGCCCCGTAGGCCACTGCTTCGTCTGGGTTGATG 1909 Query 7073 GTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATT 7132 | || ||||| || | ||||| || |||| | | | || || || || ||| Sbjct 1910 CTCTTGTTCAGCTCCCTGCCGTTGAAGAAATCTTGCAGGAGCTTCTGGATCTTAGGAATT 1969 Query 7133 CGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCT 7192 || || || || ||||||| ||| || || | | | || || || || || | || Sbjct 1970 CGGGTAGAGCCTCCGACCAGAACAATGTCCTGGATCTGTGACTTGTCCATTTTGGCATCC 2029 Query 7193 CGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCA 7252 | || | ||| || ||||| |||| | | ||| | || || |||||| Sbjct 2030 CTCAGGGCTTTCTCAACAGGCTCCAGAGTGCCCCTGAAGAGATCGGCGTTCATCTCCTCA 2089 Query 7253 AAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCA 7312 || ||||| ||||| | ||| || ||||| || | ||| ||||| | || || || || Sbjct 2090 AAGCGTGCCCGGGTGAGGGACGTGTAGAAGTCGATGCCTTCGTAGAGAGAGTCGATCTCG 2149 Query 7313 ATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAA 7372 ||| | | || | | || || || |||| ||| || | ||| || || || || | Sbjct 2150 ATGCTGGCCTGGGAGCTGGAGGACAAGGTTCTCTTGGCCCTCTCGCATGCTGTGCGCAGC 2209 Query 7373 CGACGAAGGGCACGCGGGTTACCGGAA--ATATCTTTCTTATGTTTACGTTTAAACTCTT 7430 | | | || | | ||| | || || |||||||| | || | || || || | Sbjct 2210 CTCCTCACCGCCCTCTTGTT--CTGACTGATGTCTTTCTTGTACTTTCTCTTGAATTCCT 2267 Query 7431 CAGAGAAGTG-TCGA--AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCC 7487 | ||||| | || | | | | || || ||||| || |||| || || || | Sbjct 2268 CCACAAAGTGGTTGACCATGCGGTTG---TCAAAGTCTTCCCCGCCCAGATGCGTGTCAC 2324 Query 7488 CCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACG 7547 | ||||| || || || |||||||| || | ||||| | | | || || || || | Sbjct 2325 CGGCGGTGGCCTTCACCTCAAAGATCCCATCCTCAATAGTCAGGATGGACACGTCGAAGG 2384 Query 7548 TACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCT-TTGTTCTTATCGAGA 7606 | || || ||||||||||| || || ||||| || | ||| ||| ||||| || Sbjct 2385 TGCCTCCGCCCAGGTCAAAGATCAGGACGTTGCGCTCCCC-TCTCTTGCCTTTATCCAGG 2443 Query 7607 CCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCA 7666 ||||| ||||| || || ||||| || || || || || | ||| ||| || || || Sbjct 2444 CCGTAGGCGATGGCGGCTGCCGTGGGCTCGTTGATGATCCTCAGAACGTTGAGCCCGGCG 2503 Query 7667 ATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTT 7726 || | || ||||| || || || || || || ||||| ||||| || ||||| || Sbjct 2504 ATCACGCCGGCGTCTTTGGTGGCCTGGCGCTGAGAGTCGTTGAAGTACGCGGGGACAGTG 2563 Query 7727 ACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTA 7786 | |||||| | | || |||| || || || | || || || || |||||||| Sbjct 2564 ATGACCGCATTTGACACCTTCTGCCCCAGGTAGGCCTCAGCAATCTCCTTCATTTTAACC 2623 Query 7787 AGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACT 7846 || ||||| || || || ||||||| || ||| | || || || | || ||| Sbjct 2624 AGCACCATGGAGGAGATTTCTTCAGGGTTGAATGCTTTACTCTCTCCTTTGTATTCCACT 2683 Query 7847 TCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCG 7906 |||| |||| || ||| | || | || ||||| | | ||| | |||||||| Sbjct 2684 TCAACTTTGGGCTT-TCCTC--CATTGCTGACTACCTTGAAGGGCCAGTGCTTCATATCT 2740 Query 7907 TCTTG---GACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACT 7963 ||| ||| | | ||| ||| |||| ||||| | ||||| ||||| || || Sbjct 2741 GATTGCACGACGGGATCGTCG---AACCTTCTGCCGATCAAGCGCTTGGCATCGAAGACG 2797 Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023 ||||| |||||||||||||| |||||||| || || || ||||| || | || | Sbjct 2798 GTGTTATTGGGGTTCATGGCCACCTGGTTCTTGGCAGCATCTCCGATCAGCC--TC-TCG 2854 Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083 | || || || || ||||| ||||| |||| || || |||||||| ||||| ||| Sbjct 2855 GTGTCTGTGAAGGCTACGTAGCTGGGGGTGGTTCTGTTGCCCTGGTCGTTGGCAATGATT 2914 Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCG 8143 || || ||| || | || || || || || || || ||||| | |||||| ||| Sbjct 2915 TCCACCTTTCCGTGCTGAAACACACCCACACAGGAGTAGGTGGTTCCCAGATCAATCCCG 2974 Query 8144 ATTG 8147 |||| Sbjct 2975 ATTG 2978 >seq79 Length=945648 Score = 185 bits (204), Expect = 1e-41 Identities = 368/542 (68%), Gaps = 6/542 (1%) Strand=Plus/Minus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || || || ||||| || ||||| ||||| || | || || || || || || || || Sbjct 900536 GCACCATAAGCGACAGCTTCATCAGGGTTGATGCTCTTGTTGAGCTCCTTGCCATTGAAG 900477 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 |||| | || || || || || |||||||| || || || || |||| || || Sbjct 900476 AAATCTTGCAGCAGTTTCTGGATCTTGGGGATTCGCGTAGAGCCGCCCACCAGGACAATG 900417 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 || | || | | ||| || ||||| | || || || | || ||||| || |||| Sbjct 900416 TCGTGGACCTGGGCTTTGTCCATCTTGGCATCACGGAGAGACTTCTCGACCGGATCCAAG 900357 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 |||||||| ||| ||| ||||||||||| || | ||||||||| || ||| Sbjct 900356 GTGCCACGGAACAGGTCAGCGTTCAGCTCCTCAAAACGAGCCCTGGTAATGGAGGTGTAG 900297 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || || | ||| ||||| || || |||||||| || | | || | | || || | Sbjct 900296 AAGTCGATGCCCTCGTACAAGGAGTCAATTTCGATACTGGCCTGGGTGCTGGAGGACAGG 900237 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || | |||||| || || || | ||| || | || | | ||| || Sbjct 900236 GTGCGCTTGGCTCTCTCACAGGCGGTGCGGAGACGGCGGACAGCTCTCTTGTTGTCGCTG 900177 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT-GTCGA--AGGAGTCTCGAA 7456 || || ||||| | || || || ||||| || ||||| || || | | | | | Sbjct 900176 ATGTCCTTCTTGTACTTGCGCTTGAACTCGGCAATGAAGTGGTTGACCATGCGATT---A 900120 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| ||||||||||||| || || || || || |||| || ||||||||||| || Sbjct 900119 TCGAAGTCTTCACCACCCAGATGAGTGTCTCCAGCCGTCGACTTCACTTCAAAGATTCCA 900060 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | | | || ||||||||||| |||||||| || |||||||| || ||| Sbjct 900059 TCCTCGATGGTCAGGATGGAGACATCAAACGTGCCACCACCGAGATCAAAAATAAGGACG 900000 Query 7577 TT 7578 || Sbjct 899999 TT 899998 >seq4411 Length=69203 Score = 107 bits (118), Expect = 2e-18 Identities = 111/143 (78%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAA-GACA 7653 || ||||| |||||||||||||| || || || ||||| ||||| || || |||| |||| Sbjct 61783 TTTTTATCCAGACCGTACGCGATGGCTGCAGCGGTTGGCTCATTGATGATGCGAAGGACA 61842 Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 ||||| |||| || ||| | ||||| || || || || ||||| || || || ||||| Sbjct 61843 -TTCAGCCCAGAGATGGTTCCAGCATCCTTGGTAGCCTGCCGTTGGGAGTCATTGAAGTA 61901 Query 7714 GGCCGGGACCGTTACGACCGCGT 7736 ||| ||||| || | ||| |||| Sbjct 61902 GGCGGGGACTGTGATGACAGCGT 61924 >seq744 Length=172919 Score = 82.4 bits (90), Expect = 1e-10 Identities = 135/194 (70%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 7956 CAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGAC 8015 |||| || |||||| ||||||||||||| ||| |||||||| || || || || | | Sbjct 124854 CAAAGACCGTGTTTGTGGGGTTCATGGCAACTTGATTCTTCGCTGCATCGCCAATCAATC 124913 Query 8016 GTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCG 8075 ||| || || || || || ||||| || || || | ||||| |||||||| | Sbjct 124914 TCTCAGTA---TCAGTGAAGGCTACGTAACTGGGTGTAGTCCTGTTCCCCTGGTCGTTGG 124970 Query 8076 CAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAAT 8135 |||| || || || | | | ||| | || || ||||| || || || || || | || Sbjct 124971 CAATGATCTCGACTTTGCCATGTTGGAAAACTCCTACGCAAGAGTAGGTCGTCCCCAGAT 125030 Query 8136 CAATACCGATTGCT 8149 |||| || | |||| Sbjct 125031 CAATCCCAACTGCT 125044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631154105844320