Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1686 150 4e-31 seq487837 122 2e-22 >seq1686 Length=76845 Score = 150 bits (166), Expect = 4e-31 Identities = 169/225 (75%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || | || || |||||||| || || ||||| ||||| ||||| |||| ||||| Sbjct 57385 TCTAAGACGCAGGACCAGGTGAAGGGTTGATTCTTTCTGAATGTTGTAGTCGGACAGAGT 57444 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| ||||| || || |||||||| || | || ||||| ||||||||||| Sbjct 57445 ACGGCCATCTTCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGAATGCC 57504 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095 ||| ||||| || || || |||||| |||||||||||||| ||| ||||| || Sbjct 57505 TTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTC---ACTGGGCTCCACCTC 57561 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| || |||| ||||| || || | ||||| Sbjct 57562 CAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 57606 >seq487837 Length=248 Score = 122 bits (134), Expect = 2e-22 Identities = 158/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||| || || | ||| || |||||||| || || || ||||| |||| || || | Sbjct 248 AGTCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGG 189 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| |||||||| || || ||||| || | || |||||||| ||||||||||| Sbjct 188 CCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCC 129 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||| || || || ||| |||||||||||||| ||||| || ||||| Sbjct 128 TTGTCCTGGATCTTGGCCTT----TTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTG 73 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| ||||| | || || ||||| | ||||| Sbjct 72 ATGGTCTTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 35 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102357664412516