Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1686 109 4e-19 seq487837 100 2e-16 >seq1686 Length=76845 Score = 109 bits (120), Expect = 4e-19 Identities = 152/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||||| || ||||||||||||||| ||||| || || | || |||| ||| Sbjct 57398 ACCAGGTGAAGGGTTGATTCTTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCTTCC 57457 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || || || || || | |||||||| | || | || |||||||| Sbjct 57458 AGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGG 57517 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 ||||| ||||| || || || | |||| || ||| || || | ||| ||||| | Sbjct 57518 ATCTTGGCCTTGAC--ATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCT 57575 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || || || || ||||||||||||||||| Sbjct 57576 TGCCAGTCAGGGTTTTCACAAAGATCTGCAT 57606 >seq487837 Length=248 Score = 100 bits (110), Expect = 2e-16 Identities = 150/211 (71%), Gaps = 8/211 (4%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| || ||||| ||||| ||||| || ||| | || |||| ||| Sbjct 239 ACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCC 180 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || |||||||| || || | ||||||||| | || | || |||||||| Sbjct 179 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGG 120 Query 34893 ATCTT--CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 ||||| | ||| | ||| | ||| | || ||| || || | ||| ||||| | Sbjct 119 ATCTTGGCCTTTTCTCA-ATGGTGTCGCT-----GGGCTCCACCTCCAGGGTGATGGTCT 66 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || ||||| ||||| || ||||||||||| Sbjct 65 TGCCTGTGAGGGTCTTGACGAAGATCTGCAT 35 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322650821970144