Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20]
501,148 sequences; 1,018,701,900 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq19981 127 4e-24
seq279539 111 3e-19
seq422119 109 1e-18
seq208733 107 4e-18
seq1736 102 2e-16
seq232609 91.5 3e-13
seq1395 89.7 9e-13
>seq19981
Length=13813
Score = 127 bits (140), Expect = 4e-24
Identities = 112/137 (82%), Gaps = 2/137 (1%)
Strand=Plus/Plus
Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932
|||||||| |||| || || || |||||||| || ||||||||| ||||||||||||
Sbjct 3623 GGCGAGCGTGTGGTGGCGTTCGCGGCTGTGGAAGGGATCTTTTTCTCCGGTTCGTTTGCC 3682
Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCT 25991
|||||||||||||| ||| | | | || | |||||| || ||| ||| |||||||||||
Sbjct 3683 GCCATCTTCTGGCTGAAG-AAACGAGGCCTCATGCCGGGCCTGACCTTCTCCAACGAGCT 3741
Query 25992 CATCAGCAGGGACGAGG 26008
||||||| | |||||||
Sbjct 3742 CATCAGCCGAGACGAGG 3758
>seq279539
Length=228
Score = 111 bits (122), Expect = 3e-19
Identities = 112/146 (77%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 222032 ACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGC 222091
||||||| |||||||||||| |||||||| || || | ||||| || | | |||||||
Sbjct 64 ACCCTCTTCATGAAGAGGTCGGGGATCCAGAGGGCGTAGAAGAGGTCGCGAGCCCGCTGC 123
Query 222092 TCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGC 222151
|||||| || |||| ||| |||| |||| ||||| || |||||| |||||| |||
Sbjct 124 TCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAACTCGAAGATGTCAAAGTGCCAGGGC 183
Query 222152 TCCAGATAGACGGCCAGAGCGCCGGG 222177
||||| || | ||| | || |||||
Sbjct 184 TCCAGGTACATGGCGAACGCCCCGGG 209
>seq422119
Length=456
Score = 109 bits (120), Expect = 1e-18
Identities = 102/130 (78%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 221731 CACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGT 221790
||||||||||||| |||| |||| | |||||| || || ||||||||||||||||||||
Sbjct 112 CACCTCGTCCTTGCTGGTGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGATGGT 171
Query 221791 CCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACC 221850
||||||| | || || |||||| ||| ||||||||||| ||||| ||||
Sbjct 172 GCCCAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGCGTCCTTGTACAGCATGTAGGGCGT 231
Query 221851 GCCAGTCTCC 221860
||| ||||||
Sbjct 232 GCCCGTCTCC 241
>seq208733
Length=363
Score = 107 bits (118), Expect = 4e-18
Identities = 100/127 (79%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 221121 CCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGA 221180
|||| ||||| ||||| |||||||| | | |||||||||| ||| | || || |
Sbjct 30 CCACCTGGAACTCTCCGGAGAGCACGCGGCGGGTGTACAGGTTACTGGTGTAGGGCTCCA 89
Query 221181 TGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCA 221240
|| ||||||||||||||||||||| || ||| ||| ||||||||||| |||| |||||
Sbjct 90 TGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATGGGGGCCAGCAGCA 149
Query 221241 GACTGTT 221247
| |||||
Sbjct 150 GGCTGTT 156
>seq1736
Length=128588
Score = 102 bits (112), Expect = 2e-16
Identities = 104/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932
|| ||||| |||||||||||||||| || || || ||||| ||| || ||||||||
Sbjct 22400 GGGGAGCGCGTGGTAGCCTTTGCTGCAGTTGAAGGAATCTTCTTCTCTGGGTCGTTTGCT 22341
Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992
||||||||||| | ||| ||| ||| ||||| || || || |||||||||||
Sbjct 22340 TCCATCTTCTGGTTGAAGAAGAGGGGTCTGATGCCTGGTCTCACGTTCTCCAACGAGCTG 22281
Query 25993 ATCAGCAGGGACGAGG 26008
|||||||| || ||||
Sbjct 22280 ATCAGCAGAGATGAGG 22265
>seq232609
Length=862
Score = 91.5 bits (100), Expect = 3e-13
Identities = 132/184 (72%), Gaps = 2/184 (1%)
Strand=Plus/Minus
Query 221377 CTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTC-AGGGCAGCGTGGTAGA 221435
||||||||| |||| | | ||| || |||| | || || ||||| |||| |||||
Sbjct 350 CTCGTAGGGCCCGTGCTCGGCCGCCAGGTCGCA-GCTGGCCTCCAGGGCGGCGTAGTAGA 292
Query 221436 TGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAGGGCATACGCA 221495
||||||| |||||| ||||||| || |||||| || |||||| | ||||
Sbjct 291 TGGTCTCGAAGATCTGGCTGTTGAGCAGCTGGGCCTCCGGGCTCTCGAAGGGGAAGCGCA 232
Query 221496 GCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTCTCCTGT 221555
|| ||| |||||||||| ||||| || || || ||||| |||||||| ||| | |
Sbjct 231 TCAGGATGAAGGCGTCGGCCAGGCCCTGCACCCCAATCCCGATCGGCCTGTGCCTCTTAT 172
Query 221556 TGGA 221559
||||
Sbjct 171 TGGA 168
>seq1395
Length=115546
Score = 89.7 bits (98), Expect = 9e-13
Identities = 94/124 (76%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944
|| ||||||||||| |||||||| || || ||| || || ||||| ||||||| ||||
Sbjct 12771 GTGGCCTTTGCTGCGGTGGAGGGGATTTTCTTCTCTGGGTCCTTTGCAGCCATCTACTGG 12830
Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004
| ||| ||| || ||||||||| || || ||||| ||||| |||||||| ||
Sbjct 12831 TTAAAGAAGAGAGGCCTCATGCCCGGACTCACCTACTCCAATGAGCTTATCAGCAGAGAT 12890
Query 26005 GAGG 26008
||||
Sbjct 12891 GAGG 12894
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 923026191077120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |