Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq19981 127 4e-24 seq279539 111 3e-19 seq422119 109 1e-18 seq208733 107 4e-18 seq1736 102 2e-16 seq232609 91.5 3e-13 seq1395 89.7 9e-13 >seq19981 Length=13813 Score = 127 bits (140), Expect = 4e-24 Identities = 112/137 (82%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 |||||||| |||| || || || |||||||| || ||||||||| |||||||||||| Sbjct 3623 GGCGAGCGTGTGGTGGCGTTCGCGGCTGTGGAAGGGATCTTTTTCTCCGGTTCGTTTGCC 3682 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCT 25991 |||||||||||||| ||| | | | || | |||||| || ||| ||| ||||||||||| Sbjct 3683 GCCATCTTCTGGCTGAAG-AAACGAGGCCTCATGCCGGGCCTGACCTTCTCCAACGAGCT 3741 Query 25992 CATCAGCAGGGACGAGG 26008 ||||||| | ||||||| Sbjct 3742 CATCAGCCGAGACGAGG 3758 >seq279539 Length=228 Score = 111 bits (122), Expect = 3e-19 Identities = 112/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 222032 ACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGC 222091 ||||||| |||||||||||| |||||||| || || | ||||| || | | ||||||| Sbjct 64 ACCCTCTTCATGAAGAGGTCGGGGATCCAGAGGGCGTAGAAGAGGTCGCGAGCCCGCTGC 123 Query 222092 TCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGC 222151 |||||| || |||| ||| |||| |||| ||||| || |||||| |||||| ||| Sbjct 124 TCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAACTCGAAGATGTCAAAGTGCCAGGGC 183 Query 222152 TCCAGATAGACGGCCAGAGCGCCGGG 222177 ||||| || | ||| | || ||||| Sbjct 184 TCCAGGTACATGGCGAACGCCCCGGG 209 >seq422119 Length=456 Score = 109 bits (120), Expect = 1e-18 Identities = 102/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 221731 CACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGT 221790 ||||||||||||| |||| |||| | |||||| || || |||||||||||||||||||| Sbjct 112 CACCTCGTCCTTGCTGGTGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGATGGT 171 Query 221791 CCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACC 221850 ||||||| | || || |||||| ||| ||||||||||| ||||| |||| Sbjct 172 GCCCAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGCGTCCTTGTACAGCATGTAGGGCGT 231 Query 221851 GCCAGTCTCC 221860 ||| |||||| Sbjct 232 GCCCGTCTCC 241 >seq208733 Length=363 Score = 107 bits (118), Expect = 4e-18 Identities = 100/127 (79%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 221121 CCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGA 221180 |||| ||||| ||||| |||||||| | | |||||||||| ||| | || || | Sbjct 30 CCACCTGGAACTCTCCGGAGAGCACGCGGCGGGTGTACAGGTTACTGGTGTAGGGCTCCA 89 Query 221181 TGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCA 221240 || ||||||||||||||||||||| || ||| ||| ||||||||||| |||| ||||| Sbjct 90 TGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATGGGGGCCAGCAGCA 149 Query 221241 GACTGTT 221247 | ||||| Sbjct 150 GGCTGTT 156 >seq1736 Length=128588 Score = 102 bits (112), Expect = 2e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||| |||||||||||||||| || || || ||||| ||| || |||||||| Sbjct 22400 GGGGAGCGCGTGGTAGCCTTTGCTGCAGTTGAAGGAATCTTCTTCTCTGGGTCGTTTGCT 22341 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992 ||||||||||| | ||| ||| ||| ||||| || || || ||||||||||| Sbjct 22340 TCCATCTTCTGGTTGAAGAAGAGGGGTCTGATGCCTGGTCTCACGTTCTCCAACGAGCTG 22281 Query 25993 ATCAGCAGGGACGAGG 26008 |||||||| || |||| Sbjct 22280 ATCAGCAGAGATGAGG 22265 >seq232609 Length=862 Score = 91.5 bits (100), Expect = 3e-13 Identities = 132/184 (72%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 221377 CTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTC-AGGGCAGCGTGGTAGA 221435 ||||||||| |||| | | ||| || |||| | || || ||||| |||| ||||| Sbjct 350 CTCGTAGGGCCCGTGCTCGGCCGCCAGGTCGCA-GCTGGCCTCCAGGGCGGCGTAGTAGA 292 Query 221436 TGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAGGGCATACGCA 221495 ||||||| |||||| ||||||| || |||||| || |||||| | |||| Sbjct 291 TGGTCTCGAAGATCTGGCTGTTGAGCAGCTGGGCCTCCGGGCTCTCGAAGGGGAAGCGCA 232 Query 221496 GCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTCTCCTGT 221555 || ||| |||||||||| ||||| || || || ||||| |||||||| ||| | | Sbjct 231 TCAGGATGAAGGCGTCGGCCAGGCCCTGCACCCCAATCCCGATCGGCCTGTGCCTCTTAT 172 Query 221556 TGGA 221559 |||| Sbjct 171 TGGA 168 >seq1395 Length=115546 Score = 89.7 bits (98), Expect = 9e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944 || ||||||||||| |||||||| || || ||| || || ||||| ||||||| |||| Sbjct 12771 GTGGCCTTTGCTGCGGTGGAGGGGATTTTCTTCTCTGGGTCCTTTGCAGCCATCTACTGG 12830 Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004 | ||| ||| || ||||||||| || || ||||| ||||| |||||||| || Sbjct 12831 TTAAAGAAGAGAGGCCTCATGCCCGGACTCACCTACTCCAATGAGCTTATCAGCAGAGAT 12890 Query 26005 GAGG 26008 |||| Sbjct 12891 GAGG 12894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923026191077120