Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq277378 113 3e-19 seq79 96.9 2e-14 seq744 93.3 3e-13 >seq277378 Length=4497 Score = 113 bits (124), Expect = 3e-19 Identities = 356/547 (65%), Gaps = 6/547 (1%) Strand=Plus/Minus Query 474330 CAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAG 474389 |||| || |||||| | ||||| || ||| ||||| | ||| | || | || || | Sbjct 2978 CAATCGGGATTGATCTGGGAACCACCTACTCCTGTGTGGGTGTGTTTCAGCACGGAAAGG 2919 Query 474390 TAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTG 474449 | ||||| |||||||| ||||| || || ||||| || || || || | || || | Sbjct 2918 TGGAAATCATTGCCAACGACCAGGGCAACAGAACCACCCCCAGCTACGTAGCCTTCACAG 2859 Query 474450 AAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATA 474509 | || || || || ||||||||||| || | || | || || || ||| | Sbjct 2858 ACACCGAGAGGCTGATCGGAGATGCTGCCAAGAACCAGGTGGCCATGAACCCCAATAACA 2799 Query 474510 CTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTG 474569 | | || ||||| || | ||||| || | | || || ||| || || ||||| | Sbjct 2798 CCGTCTTCGATGCCAAGCGCTTGATCGGCAGAAGGTTCGACGATCCCGTCGTGCAATCAG 2739 Query 474570 ATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAA--GC 474627 ||||| || ||||| || ||||| | | ||| || || || | | ||| | Sbjct 2738 ATATGAAGCACTGGCCCTTCAAGGTAGTCAGCAATGGAGGAAAGCCCAAAGTTGAAGTGG 2679 Query 474628 AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGC 474687 |||||| ||| || | |||| ||| || ||| |||| || || ||||| | | Sbjct 2678 AATACA--AAGGAGAGAGTAAAGCATTCAACCCTGAAGAAATCTCCTCCATGGTGCTGGT 2621 Query 474688 CAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTA 474746 |||||||| | | || ||| | || || || || | || | |||| || || | Sbjct 2620 TAAAATGAAGGAGATTGCTGAG-GCCTACCTGGGGCAGAAGGTGTCAAATGCGGTCATCA 2562 Query 474747 CTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTG 474806 |||| || || || || || || ||||| || || || || ||||| || || || | Sbjct 2561 CTGTCCCCGCGTACTTCAACGACTCTCAGCGCCAGGCCACCAAAGACGCCGGCGTGATCG 2502 Query 474807 CAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTC 474866 | || || || ||| | | || || || || || || |||||||| | || || || | Sbjct 2501 CCGGGCTCAACGTTCTGAGGATCATCAACGAGCCCACGGCAGCCGCCATCGCCTACGGCC 2442 Query 474867 TTGATAA 474873 | ||||| Sbjct 2441 TGGATAA 2435 >seq79 Length=945648 Score = 96.9 bits (106), Expect = 2e-14 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 || || ||||| || || |||||||| || || ||||| || || || || || | |||| Sbjct 899529 ACGGTACCAGCTTACTTCAATGATTCCCAGCGGCAAGCTACCAAGGACGCCGGTACAATT 899588 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 ||||||| |||||| | || || || ||||||||||| || || || |||||||||| Sbjct 899589 TCAGGTCTAAATGTTCTGCGAATCATCAATGAACCAACTGCTGCTGCTATTGCTTATGGA 899648 Query 474866 CTTGATAAGAA 474876 | || ||||| Sbjct 899649 TTGGACAAGAA 899659 Score = 93.3 bits (102), Expect = 3e-13 Identities = 129/180 (72%), Gaps = 3/180 (2%) Strand=Plus/Plus Query 474317 ATGTCCA---GAATTGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTT 474373 ||||||| ||| ||| ||||||||||| | || || || ||| || |||| ||| Sbjct 898668 ATGTCCAAGGGAACGGCAGTTGGTATTGATCTGGGGACAACCTACTCCTGCGTAGGTGTC 898727 Query 474374 TGGCAAAATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCA 474433 | || |||| ||||| || || |||||||| || || || || || || ||||| Sbjct 898728 TTCCAGCATGGCAAAGTTGAGATCATTGCCAACGATCAGGGAAACAGGACCACACCCAGC 898787 Query 474434 TATGTTTCTTTTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCA 474493 ||||| |||| || || ||||| | || |||||||| ||||| || |||| | |||| Sbjct 898788 TATGTAGCTTTCACCGATACTGAGCGGCTGATTGGAGACGCTGCAAAGAATCAGGTTGCA 898847 >seq744 Length=172919 Score = 93.3 bits (102), Expect = 3e-13 Identities = 107/143 (75%), Gaps = 1/143 (1%) Strand=Plus/Plus Query 474727 AGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAAC 474786 ||| || |||| || || || || || || || || ||||| || || ||||| || || Sbjct 129703 AGTTACCAATGCTGTGATCACGGTGCCTGCCTACTTCAATGACTCCCAGCGTCAGGCTAC 129762 Query 474787 TAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGC 474846 |||||||| |||| || | ||||||||||| | ||||| || || || |||||||| Sbjct 129763 CAAAGATGCTGGAACTATCTCTGGTCTTAATGTGCTGCGTATCATCAACGAGCCAACAGC 129822 Query 474847 AGCCGCACTTGCTTATGGTCTTG 474869 || ||| |||| ||||| |||| Sbjct 129823 TGCTGCAATTGCATATGG-CTTG 129844 Score = 86.0 bits (94), Expect = 4e-11 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 474347 GGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAAATAATTGCCAAT 474406 || || || ||| |||||||| |||| ||| |||| ||||| || || ||||||||| Sbjct 128849 GGGACCACCTACTCTTGTGTAGGAGTTTTCCAACATGGAAAAGTTGAGATCATTGCCAAT 128908 Query 474407 GACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACTGAACATCTTATT 474466 ||||| ||||| || || || || || || | || ||||| ||||| | | ||| Sbjct 128909 GACCAGGGTAACAGGACCACCCCCAGTTACGTAGCATTCACTGATACTGAGCGATTGATT 128968 Query 474467 GGAGATGCTGCTAAATATCAAGCTGCA 474493 || ||||| || || |||||| |||| Sbjct 128969 GGGGATGCAGCAAAGAATCAAGTTGCA 128995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3246682530709904