Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20]
501,148 sequences; 1,018,701,900 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq277378 113 3e-19
seq79 96.9 2e-14
seq744 93.3 3e-13
>seq277378
Length=4497
Score = 113 bits (124), Expect = 3e-19
Identities = 356/547 (65%), Gaps = 6/547 (1%)
Strand=Plus/Minus
Query 474330 CAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAG 474389
|||| || |||||| | ||||| || ||| ||||| | ||| | || | || || |
Sbjct 2978 CAATCGGGATTGATCTGGGAACCACCTACTCCTGTGTGGGTGTGTTTCAGCACGGAAAGG 2919
Query 474390 TAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTG 474449
| ||||| |||||||| ||||| || || ||||| || || || || | || || |
Sbjct 2918 TGGAAATCATTGCCAACGACCAGGGCAACAGAACCACCCCCAGCTACGTAGCCTTCACAG 2859
Query 474450 AAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATA 474509
| || || || || ||||||||||| || | || | || || || ||| |
Sbjct 2858 ACACCGAGAGGCTGATCGGAGATGCTGCCAAGAACCAGGTGGCCATGAACCCCAATAACA 2799
Query 474510 CTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTG 474569
| | || ||||| || | ||||| || | | || || ||| || || ||||| |
Sbjct 2798 CCGTCTTCGATGCCAAGCGCTTGATCGGCAGAAGGTTCGACGATCCCGTCGTGCAATCAG 2739
Query 474570 ATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAA--GC 474627
||||| || ||||| || ||||| | | ||| || || || | | ||| |
Sbjct 2738 ATATGAAGCACTGGCCCTTCAAGGTAGTCAGCAATGGAGGAAAGCCCAAAGTTGAAGTGG 2679
Query 474628 AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGC 474687
|||||| ||| || | |||| ||| || ||| |||| || || ||||| | |
Sbjct 2678 AATACA--AAGGAGAGAGTAAAGCATTCAACCCTGAAGAAATCTCCTCCATGGTGCTGGT 2621
Query 474688 CAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTA 474746
|||||||| | | || ||| | || || || || | || | |||| || || |
Sbjct 2620 TAAAATGAAGGAGATTGCTGAG-GCCTACCTGGGGCAGAAGGTGTCAAATGCGGTCATCA 2562
Query 474747 CTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTG 474806
|||| || || || || || || ||||| || || || || ||||| || || || |
Sbjct 2561 CTGTCCCCGCGTACTTCAACGACTCTCAGCGCCAGGCCACCAAAGACGCCGGCGTGATCG 2502
Query 474807 CAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTC 474866
| || || || ||| | | || || || || || || |||||||| | || || || |
Sbjct 2501 CCGGGCTCAACGTTCTGAGGATCATCAACGAGCCCACGGCAGCCGCCATCGCCTACGGCC 2442
Query 474867 TTGATAA 474873
| |||||
Sbjct 2441 TGGATAA 2435
>seq79
Length=945648
Score = 96.9 bits (106), Expect = 2e-14
Identities = 100/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805
|| || ||||| || || |||||||| || || ||||| || || || || || | ||||
Sbjct 899529 ACGGTACCAGCTTACTTCAATGATTCCCAGCGGCAAGCTACCAAGGACGCCGGTACAATT 899588
Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865
||||||| |||||| | || || || ||||||||||| || || || ||||||||||
Sbjct 899589 TCAGGTCTAAATGTTCTGCGAATCATCAATGAACCAACTGCTGCTGCTATTGCTTATGGA 899648
Query 474866 CTTGATAAGAA 474876
| || |||||
Sbjct 899649 TTGGACAAGAA 899659
Score = 93.3 bits (102), Expect = 3e-13
Identities = 129/180 (72%), Gaps = 3/180 (2%)
Strand=Plus/Plus
Query 474317 ATGTCCA---GAATTGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTT 474373
||||||| ||| ||| ||||||||||| | || || || ||| || |||| |||
Sbjct 898668 ATGTCCAAGGGAACGGCAGTTGGTATTGATCTGGGGACAACCTACTCCTGCGTAGGTGTC 898727
Query 474374 TGGCAAAATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCA 474433
| || |||| ||||| || || |||||||| || || || || || || |||||
Sbjct 898728 TTCCAGCATGGCAAAGTTGAGATCATTGCCAACGATCAGGGAAACAGGACCACACCCAGC 898787
Query 474434 TATGTTTCTTTTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCA 474493
||||| |||| || || ||||| | || |||||||| ||||| || |||| | ||||
Sbjct 898788 TATGTAGCTTTCACCGATACTGAGCGGCTGATTGGAGACGCTGCAAAGAATCAGGTTGCA 898847
>seq744
Length=172919
Score = 93.3 bits (102), Expect = 3e-13
Identities = 107/143 (75%), Gaps = 1/143 (1%)
Strand=Plus/Plus
Query 474727 AGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAAC 474786
||| || |||| || || || || || || || || ||||| || || ||||| || ||
Sbjct 129703 AGTTACCAATGCTGTGATCACGGTGCCTGCCTACTTCAATGACTCCCAGCGTCAGGCTAC 129762
Query 474787 TAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGC 474846
|||||||| |||| || | ||||||||||| | ||||| || || || ||||||||
Sbjct 129763 CAAAGATGCTGGAACTATCTCTGGTCTTAATGTGCTGCGTATCATCAACGAGCCAACAGC 129822
Query 474847 AGCCGCACTTGCTTATGGTCTTG 474869
|| ||| |||| ||||| ||||
Sbjct 129823 TGCTGCAATTGCATATGG-CTTG 129844
Score = 86.0 bits (94), Expect = 4e-11
Identities = 107/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 474347 GGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAAATAATTGCCAAT 474406
|| || || ||| |||||||| |||| ||| |||| ||||| || || |||||||||
Sbjct 128849 GGGACCACCTACTCTTGTGTAGGAGTTTTCCAACATGGAAAAGTTGAGATCATTGCCAAT 128908
Query 474407 GACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACTGAACATCTTATT 474466
||||| ||||| || || || || || || | || ||||| ||||| | | |||
Sbjct 128909 GACCAGGGTAACAGGACCACCCCCAGTTACGTAGCATTCACTGATACTGAGCGATTGATT 128968
Query 474467 GGAGATGCTGCTAAATATCAAGCTGCA 474493
|| ||||| || || |||||| ||||
Sbjct 128969 GGGGATGCAGCAAAGAATCAAGTTGCA 128995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3246682530709904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |