Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq366755 242 4e-59 seq769 232 8e-56 seq5258 134 2e-26 >seq366755 Length=774 Score = 242 bits (268), Expect = 4e-59 Identities = 336/468 (72%), Gaps = 2/468 (0%) Strand=Plus/Plus Query 160525 CCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTA 160584 ||| | ||| ||||||||||||| || |||| || ||| | |||||||| | Sbjct 62 CCACCTCGTACCGCTTCTTCCACCGCGCCTCCTTGAAGGGCGGCGTCTTCTCCGTCTCCA 121 Query 160585 GACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCG 160644 | ||||| || | || | ||||||| || ||||| ||||| ||||| |||| Sbjct 122 GGCTGTTCTTCCCCTGCAGGGCCCTCAGCTGGCGCACCATCTCCAGGTTGGTCTTCAGCG 181 Query 160645 GAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGT 160704 | ||||| ||||||| ||| | | |||| |||| ||||| ||| || ||||| Sbjct 182 GGAAGTCCTGGCCGCACAGGTTGACGAAGTACCTCCAGGGGGCGCTGTGGTTGTACAGGT 241 Query 160705 CCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTA 160764 | | |||||| || | || |||||||| ||||||||| |||||||| ||| |||| | Sbjct 242 CGCCCATGCAGTTGAGGTCGGCCTGCACCCGGCTCCAGCTGGCGTACACCACGCTCTCCA 301 Query 160765 GTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAGA 160824 | ||||| | |||||||| ||||| || || |||| | ||| ||| | || Sbjct 302 GCCGGCTGGCGATGAAGACGTTGTCGAAGCAGGAGGCGATCTGCCGCACGGCCGAGAGGA 361 Query 160825 ACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGG 160884 | || |||||| | ||||||||| ||||| ||||||||||| |||||||||| || Sbjct 362 AGGTCGACGGCGCCTTGCTGTCCACGTGGACGCAGTACAGGTTCTGGGGCGCGTAGACGG 421 Query 160885 CCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCG 160944 |||| |||| ||||||||| ||| ||||| || |||| |||||| ||||| || || | Sbjct 422 CCCTCAGCAGCCTCTCGAAGGTCTGGATCTTGTGGTGGACCACGATGGAGTACGCGATGG 481 Query 160945 GAAACTCGGTCTCCTCGCGACTCAG-GGACCCGGTCAGGTACTTTCGC 160991 | ||| || ||||||||| ||||| || ||| || |||||| ||| Sbjct 482 GGAACCGGGCCTCCTCGCGGCTCAGCGGGAACGG-CACGTACTTGCGC 528 >seq769 Length=195200 Score = 232 bits (256), Expect = 8e-56 Identities = 591/886 (67%), Gaps = 24/886 (3%) Strand=Plus/Minus Query 160084 CGTCAACGTCTTCGTCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGT 160143 |||| || || ||| || || || ||||| || || || | ||| || ||||||| Sbjct 90996 CGTCCACTTCGGGGTCAAACTTGTTGGCGAAAAGGTGATGCTGG--CTG-AGCATCCAGT 90940 Query 160144 GCACGTCTCCGGACCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGT 160203 | | ||| |||| ||| | ||||| |||| | | ||| ||| |||| ||||||| Sbjct 90939 GGAGGTCCCCGGTGCCGTAGACGCACACGGCTCTTCGGTGAGTCCCGGTGCAGGGCGGGT 90880 Query 160204 ACAGAGCTCCTTTCGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCG 160263 | | || || ||| |||||| ||||| ||| ||||||||| | | ||| || | Sbjct 90879 AGGGCGCACCCTTCCTCACGTCCCCTTCCAGGTAGCTCCACTTCACCAGGCGGGCGATGG 90820 Query 160264 CCTGCATGTCGGAGGTGTCGTATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCA 160323 ||| |||||| || | ||| ||| | ||||| || ||||| ||| ||||| Sbjct 90819 CCTCCATGTCCGACTGCTGGTACTTGCTGTTGGGGGGATAGGAGCCGGGGACGGAGGGCA 90760 Query 160324 TACGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCA 160383 | | ||| |||||||||||||||||||||||||||||||| || ||||| ||| || | Sbjct 90759 TTCTCTGCAGGGTGGCCCACAGGTGTTCGTCGGGGCTGTAGGTATCCTTCTCCCACTCGA 90700 Query 160384 TGAACTCTCCGATTAACCTGTCCCGCAGA-ACGTGAGTAACGTAGGATCTGGTCACGACA 160442 ||| ||| |||| | |||| | ||| | || | | ||| || || Sbjct 90699 TGAGGGA-CCGCACCTCCTGGCTTTCAGACAGGTGCCTCACAAACTCCCGGGTGACCACG 90641 Query 160443 AAGTACGCGCTGCCGGAGAATATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCG 160502 ||||| ||| | || ||||| || || || || || || | || || | | | Sbjct 90640 AAGTAGGCGTTCCCAGAGAACATAGGGGTGCTGATTGGGGGAGGATCCTTCTTCAG---- 90585 Query 160503 GTGTTAGAC---ACCACTCCTTTCACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTG 160559 ||| | | | ||| | | | || ||| || | | |||| | | | ||||| Sbjct 90584 --GTTTGTCCTGATCACGGCGTGCGTCACGTTGTGGCGGTACATCCAGCGGCCTTTCTTG 90527 Query 160560 TGCGGTGG-CATGCGTTCCGTCTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTT 160618 | | || | | ||| | ||| | ||||| ||||||||| ||| || ||| Sbjct 90526 TA-GTTGTTCGTCTCTTCGGACTCCATGCTGTTCCTGCCGTCGAGCTGTTTGAGA-GCTC 90469 Query 160619 G-ACGATCTCTAGGTTCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACT 160677 | |||||||| |||||| |||| || |||||||| ||||| ||| | || |||| Sbjct 90468 GCACGATCTCCGCGTTCGTTTTGATGGGGAAGTCGGTGCCGCAGGTGTTGAGCAGGTACC 90409 Query 160678 TCCATTTCG---CGCTCAGGTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGC 160734 |||| || || | || || |||||| |||||| || | || || ||||| | Sbjct 90408 TCCAC--CGGACCGGCGACTTCATG-AGGTCCTCCATGCAGTTGAGGTCCGCTTGCACCC 90352 Query 160735 GGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAAC 160794 || |||||| ||||| | ||| |||| || | ||||||||||| ||||| | | Sbjct 90351 GGGACCAGGACGCGTATATCACGCTCTCCAGCCTGCTGGCCACAAACACGTTGGGCAGGC 90292 Query 160795 ACGACACGATTCCCACCACCGCCAGAAAGAACATCTTATCCGCCTTTCGGTCCACGTGCA 160854 | || ||||| ||| || || || ||| || | ||| ||||||||||||| Sbjct 90291 AGGAGACGATGCCCTGGACGGCAAGCCTGAAGGCCTCTGGGGACTTGCGGTCCACGTGCA 90232 Query 160855 CGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTATCT 160914 |||| |||| ||| || ||| |||| || |||| || | ||||||||||||||| || | Sbjct 90231 CGCAGTACACGTTGTGGGGCACGTATATAGCCCGCAGGAGCCTCTCGAACATCTCGATTT 90172 Query 160915 TATGATGGATCACGATAGAGTAGGCTATCGGAAACTCGGTCTCCTC 160960 | | |||| ||| || ||||| || || || ||||| ||||||| Sbjct 90171 TCTCGTGGACCACCATGGAGTACGCGATGGGGAACTCCATCTCCTC 90126 >seq5258 Length=27050 Score = 134 bits (148), Expect = 2e-26 Identities = 231/335 (69%), Gaps = 3/335 (1%) Strand=Plus/Minus Query 160050 CGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTT 160109 ||||||| | ||||| || || ||||||| ||| ||| |||||| || || Sbjct 10992 CGCAGATACTTCTCCAGGCAGTGCACGGCGATGGGGTCGGTGTCGGTGTCGAACTTGTTG 10933 Query 160110 GCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAG 160169 ||||| || || | ||||| || |||||| || ||| ||| ||| | |||||| Sbjct 10932 GCGAAGAGCTGCGGC---TTCTGCAGCATCCAGCCCAGGTCGCCGACGCCGTAGACGCAG 10876 Query 160170 ACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCT 160229 | ||| || | ||| ||| ||||||||||||||| || || |||| | | | || Sbjct 10875 ATGGATCGCACGTGGTGGCCCCTGCAAGGCGGGTACATGGCGCCCTTCGACTCCGCCCCC 10816 Query 160230 TCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTG 160289 || |||||||||||||||| | || ||| | || | | ||| | |||||| | Sbjct 10815 TCAAAGTACTGCCACTTCACCAGCCGGGCGAGGGCGTTGACGTCCGTCACGTCGTAGCGG 10756 Query 160290 TACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGT 160349 | | ||| | || ||||| |||||||||| | ||| || |||||||||||| Sbjct 10755 TGGTTGCTGGGTATGGACCCGGGCGCGCCGGGCATCCTCTGCAGCGTGGCCCACAGGAAC 10696 Query 160350 TCGTCGGGGCTGTACGTGTCCTTAGACCATTCCAT 160384 |||||||||||||| ||||| | ||| ||||| Sbjct 10695 TCGTCGGGGCTGTAGCCGTCCTGCGCCCACTCCAT 10661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 573603296904480