Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq235 93.3 1e-13 >seq235 Length=416785 Score = 93.3 bits (102), Expect = 1e-13 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666 |||||| || |||||| ||||||||||| || || || | | || ||||| || || Sbjct 89599 ACCAGTCTCAGCTGTTTTCACAGCTGTATCGATAAGCCCCTCTCTCCCGCCCATGGCGTG 89540 Query 302667 GAAGAATAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCG 302725 |||||| | ||| || ||| || || | | ||||| |||| || || || | Sbjct 89539 GAAGAAAAACTCGGTTGG-CGTGAGGCCGGCCAGGTAGGAGTTCTCCACAAAGCCCCTGC 89481 Query 302726 CCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATG 302785 ||| ||| | |||| |||| | ||||| ||||| |||| || || ||||| | | Sbjct 89480 TCTCAGGCCCGTAGTCGTCCTTGATGAAGTGCGGCAGTGTCCGGTGCTTGAAGCCGAAGG 89421 Query 302786 GGATACGCTTTCCATCAACGTTCTGCTGTCCCA 302818 |||| ||||| || || ||||||||||| |||| Sbjct 89420 GGATCCGCTTACCCTCCACGTTCTGCTGCCCCA 89388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1462367119902876